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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_3793 and Psest_3794 are separated by 146 nucleotides
Psest_3794 and Psest_3795 are separated by 103 nucleotides
Psest_3795 and Psest_3796 are separated by 58 nucleotides
Psest_3796 and Psest_3797 are separated by 157 nucleotides
Psest_3793: Psest_3793 - D-alanine dehydrogenase (EC 1.4.99.-)
(from data)
, at 3,961,602 to 3,962,900
_3793
Psest_3794: Psest_3794 - Transcriptional regulators, at 3,963,047 to 3,963,535
_3794
Psest_3795: Psest_3795 - Glycine/D-amino acid oxidases (deaminating), at 3,963,639 to 3,964,973
_3795
Psest_3796: Psest_3796 - Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes, at 3,965,032 to 3,966,579
_3796
Psest_3797: Psest_3797 - hypothetical protein, at 3,966,737 to 3,967,480
_3797
Group
Condition
Psest
_3793
Psest
_3794
Psest
_3795
Psest
_3796
Psest
_3797
nitrogen source
L-Alanine (N)
-6.5
-7.2
-0.1
+0.0
-0.2
carbon source
D-Alanine (C)
-5.4
-6.6
-0.0
-0.0
+0.3
carbon source
D-Alanine (C)
-5.3
-6.4
-0.1
+0.0
+0.0
nitrogen source
D-Alanine (N)
-5.7
-6.0
-0.0
+0.0
+0.1
nitrogen source
D-Alanine (N)
-6.2
-5.6
-0.1
+0.1
+0.3
nitrogen source
L-Alanine (N)
-5.1
-6.0
-0.2
+0.0
-0.1
nitrogen source
L-Alanine (N)
-4.5
-4.9
-0.5
-0.0
-0.1
nitrogen source
D-Alanine (N)
-3.9
-4.5
-0.3
-0.1
-0.4
carbon source
L-Alanine (C)
-4.1
-3.6
-0.2
-0.0
+0.2
carbon source
L-Alanine (C)
-4.0
-3.7
+0.2
-0.1
+0.2
stress
L-Lysine 200 mM
-0.3
+0.1
-0.9
-1.1
-0.3
stress
Chlorate 75 mM
-1.1
-0.2
-0.8
-0.1
-0.3
nitrogen source
Putrescine (N)
-1.6
-0.5
-0.6
+0.1
+0.1
stress
L-Lysine 200 mM
-0.0
+0.1
-1.2
-0.8
-0.5
stress
Def Carbenicillin 0.008 mg/ml
-0.6
-0.1
-0.9
-0.2
-0.7
nitrogen source
Putrescine (N)
-1.3
-0.6
-0.7
+0.1
+0.1
stress
Fusidic 0.016 mg/ml
-0.0
+0.1
-1.9
+0.3
-0.6
anaerobic
Nitrite/ lactate media with Nitrite 20mM
-0.8
-0.2
-0.7
-0.2
-0.0
nitrogen source
L-Valine (N)
-0.5
-0.4
-1.0
+0.1
-0.1
carbon source
butyrate (C)
-0.0
+0.0
-1.7
+0.1
-0.3
nitrogen source
Putrescine (N)
-1.0
-0.4
-1.0
+0.1
+0.5
carbon source
propionate (C)
-0.7
-0.2
+0.0
+0.1
-0.9
stress
Def Chloride 400 mM
+0.1
+0.5
-2.2
+0.1
-0.2
nitrogen source
L-Valine (N)
-0.6
-0.1
-1.2
-0.0
+0.3
stress
perchlorate 25 mM
-0.7
-0.6
+0.3
+0.2
-0.3
stress
nitrate 200 mM
+0.3
-0.0
-1.0
+0.4
-0.3
RCH2 grown on a colony of N2F3
-0.6
+0.3
-0.5
-0.1
+0.4
stress
Phosphomycin 0.012 mg/ml
+0.3
+0.4
-0.9
-0.1
+0.1
stress
D-Cycloserine 0.032 mg/ml
+0.4
+0.9
-0.6
+0.0
-0.1
stress
Def Chlorate 40 mM
+0.6
+0.6
-0.6
+0.1
-0.1
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