Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3775 and Psest_3776 are separated by 130 nucleotidesPsest_3776 and Psest_3777 are separated by 38 nucleotidesPsest_3777 and Psest_3778 are separated by 224 nucleotidesPsest_3778 and Psest_3779 are separated by 97 nucleotides Psest_3775: Psest_3775 - Mg chelatase-related protein, at 3,941,122 to 3,942,618 _3775 Psest_3776: Psest_3776 - choline/carnitine/betaine transport, at 3,942,749 to 3,944,722 _3776 Psest_3777: Psest_3777 - diguanylate cyclase (GGDEF) domain, at 3,944,761 to 3,946,419 _3777 Psest_3778: Psest_3778 - ATP-dependent DNA helicase Rep, at 3,946,644 to 3,948,653 _3778 Psest_3779: Psest_3779 - channel protein, hemolysin III family, at 3,948,751 to 3,949,368 _3779
Group Condition Psest_3775 Psest_3776 Psest_3777 Psest_3778 Psest_3779
stress nitrate 200 mM +0.1 -0.6 -3.1 N.D. -0.0
stress nitrate 250 mM +0.9 -1.0 -2.4 N.D. -0.4
carbon source L-tyrosine (C) +0.7 -0.3 -2.6 N.D. -0.6
stress Chloride 200 mM +0.1 -0.3 -2.3 N.D. -0.2
stress Doxycycline hyclate 0.0002 mg/ml -0.5 -0.3 -1.3 N.D. -0.4
stress Def Fusidic 0.032 mg/ml +0.0 -0.2 -2.0 N.D. -0.3
stress Polymyxin B sulfate 0.0001 mg/ml -1.4 +0.0 -1.1 N.D. -0.0
stress Chloride 200 mM +0.0 -0.7 -1.7 N.D. +0.0
stress Def Benzalkonium Chloride 0.002 mg/ml +0.8 -0.1 -2.3 N.D. -0.6
stress methylglyoxal 0.0016 vol% -0.8 -0.3 -0.6 N.D. -0.6
carbon source L-tyrosine (C) +0.5 -0.0 -2.0 N.D. -0.5
stress Def Carbenicillin 0.02 mg/ml +0.5 +0.2 -2.4 N.D. +0.2
stress A22 0.002 mg/ml +0.2 +0.2 -1.8 N.D. -0.0
nitrogen source L-Isoleucine (N) +0.3 +0.1 -2.1 N.D. +0.3
stress Dimethyl Sulfoxide 5 vol% +0.7 -0.2 -1.5 N.D. -0.1
stress Neomycin 0.004 mg/ml +0.5 -0.2 -1.4 N.D. -0.1
nitrogen source nitrate (N) +0.7 -0.1 -1.4 N.D. -0.2
nitrogen source Glycine (N) +0.6 -0.3 -1.4 N.D. +0.2
nitrogen source nitrite (N) +0.7 -0.2 -1.5 N.D. +0.2
stress Gentamicin 0.0016 mg/ml +0.8 -0.1 -1.5 N.D. +0.3
stress Def Carbenicillin 0.008 mg/ml +1.0 -0.5 -0.6 N.D. +0.1
stress Def 2-Furfuraldehyde 0.032 vol% +1.4 +0.0 -1.8 N.D. +0.3
nitrogen source nitrite (N) +1.1 -0.3 -0.8 N.D. -0.1
stress Fusidic 0.016 mg/ml +1.1 -0.0 -1.2 N.D. +0.2
carbon source butyrate (C) +1.2 -0.2 -0.5 N.D. -0.3
stress 2-Furfuraldehyde 0.05 vol% +0.1 -0.4 +1.2 N.D. -0.4
stress Cephalothin 0.04 mg/ml +1.3 +0.1 -0.8 N.D. -0.1
stress Choline chloride 90 mM -1.2 +2.1 +0.3 N.D. -0.2
stress L-Lysine 200 mM +0.1 +1.7 -0.5 N.D. +0.0
stress Choline chloride 90 mM -0.1 +2.5 +0.7 N.D. +0.3
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