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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_3752 and Psest_3753 are separated by 21 nucleotides
Psest_3753 and Psest_3754 are separated by 41 nucleotides
Psest_3754 and Psest_3755 are separated by 92 nucleotides
Psest_3755 and Psest_3756 are separated by 68 nucleotides
Psest_3752: Psest_3752 - hypothetical protein, at 3,923,384 to 3,923,626
_3752
Psest_3753: Psest_3753 - Acetyltransferases, at 3,923,648 to 3,924,127
_3753
Psest_3754: Psest_3754 - Uncharacterized protein involved in response to NO, at 3,924,169 to 3,925,317
_3754
Psest_3755: Psest_3755 - hypothetical protein, at 3,925,410 to 3,925,937
_3755
Psest_3756: Psest_3756 - hypothetical protein, at 3,926,006 to 3,926,449
_3756
Group
Condition
Psest
_3752
Psest
_3753
Psest
_3754
Psest
_3755
Psest
_3756
stress
Fusidic 0.016 mg/ml
-0.6
-0.4
+0.3
-0.0
-1.7
stress
Zinc 0.12 mM
-0.6
+0.1
-0.7
+0.1
-1.2
RCH2 grown on a colony of 8R2A
-0.6
-0.9
-0.7
+0.3
-0.3
stress
Doxycycline hyclate 0.0002 mg/ml
-0.6
-0.8
+0.3
-0.0
-0.9
stress
Def Carbenicillin 0.008 mg/ml
-1.2
-0.4
+0.4
-0.1
-0.8
stress
5-Hydroxymethylfurfural 5 mM
-1.1
-0.3
-0.8
+0.1
+0.2
nitrogen source
nitrite (N)
-0.9
-0.4
+0.5
+0.1
-1.3
RCH2 grown on a colony of N2A2
+0.4
-0.3
-0.6
-0.1
-1.4
stress
nitrate 250 mM
-0.7
-0.9
+0.4
-0.3
-0.1
stress
Choline Lysine 20 mM
-0.3
+0.3
-1.4
-0.2
-0.0
stress
Chlorate 75 mM
-0.8
-0.6
+0.3
-0.0
-0.5
RCH2 grown on a colony of N2A2
-0.5
-0.3
-0.9
-0.3
+0.4
stress
Benzethonium chloride 0.01 mM
-0.7
-0.1
+0.7
-0.2
-1.2
carbon source
Ethanol (C)
-0.5
-0.1
+0.7
-0.1
-1.0
anaerobic
Nitrate/ lactate media with Nitrate 250mM
-0.5
+0.2
-1.1
+0.5
-0.0
stress
Benzethonium chloride 0.0125 mM
+0.2
+0.5
-0.7
+0.1
-1.0
stress
Def Neomycin 0.0008 mg/ml
+0.5
-0.4
+0.2
+0.1
-1.1
stress
Carbenicillin 0.0065 mg/ml
-0.9
+0.7
-0.7
+0.2
+0.0
stress
Cephalothin 0.04 mg/ml
-0.5
-0.2
+0.8
+0.3
-1.0
stress
Nalidixic 0.00390625 mg/ml
-0.3
-1.0
+0.7
-0.3
+0.4
carbon source
propionate (C)
+0.5
-0.2
+0.6
-0.3
-0.9
stress
Thallium(I) acetate 0.09 mg/ml
-0.3
+0.2
-1.1
-0.1
+1.0
carbon source
D-Gluconic Acid (C)
-0.1
+0.2
+0.8
-0.0
-1.1
RCH2 grown on a colony of Serratia
+0.2
-0.9
+1.1
+0.1
-0.4
stress
2-Furfuraldehyde 0.05 vol%
+0.7
+0.5
-0.6
+0.1
-0.5
stress
Aluminum chloride 0.3 mM
-0.8
+0.3
-0.3
+0.1
+1.0
stress
nitrate 200 mM
+0.4
+0.3
+0.5
+0.1
-1.0
nitrogen source
L-Citrulline (N)
+0.7
+0.3
+0.4
+0.2
-0.8
carbon source
L-tyrosine (C)
-0.8
+0.7
+0.1
+0.0
+1.2
nitrogen source
L-Citrulline (N)
-0.6
+0.3
+1.1
+0.2
+0.1
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