Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3747 and Psest_3748 overlap by 4 nucleotidesPsest_3748 and Psest_3749 are separated by 155 nucleotidesPsest_3749 and Psest_3750 overlap by 4 nucleotidesPsest_3750 and Psest_3751 are separated by 207 nucleotides Psest_3747: Psest_3747 - Uroporphyrinogen-III synthase, at 3,918,095 to 3,918,865 _3747 Psest_3748: Psest_3748 - porphobilinogen deaminase, at 3,918,862 to 3,919,800 _3748 Psest_3749: Psest_3749 - Response regulator of the LytR/AlgR family, at 3,919,956 to 3,920,702 _3749 Psest_3750: Psest_3750 - Predicted signal transduction protein with a C-terminal ATPase domain, at 3,920,699 to 3,921,757 _3750 Psest_3751: Psest_3751 - argininosuccinate lyase, at 3,921,965 to 3,923,359 _3751
Group Condition Psest_3747 Psest_3748 Psest_3749 Psest_3750 Psest_3751
carbon source D-Gluconic Acid (C) N.D. N.D. -5.8 +0.2 N.D.
carbon source D-Gluconic Acid (C) N.D. N.D. -4.5 +0.7 N.D.
stress Def Cephalothin 0.04 mg/ml N.D. N.D. -1.9 -0.1 N.D.
nitrogen source Glycine (N) N.D. N.D. -1.2 -0.8 N.D.
nitrogen source L-Isoleucine (N) N.D. N.D. -1.0 -0.8 N.D.
nitrogen source L-Isoleucine (N) N.D. N.D. -1.0 -0.6 N.D.
carbon source D-Fructose (C) N.D. N.D. -1.5 -0.1 N.D.
nitrogen source Putrescine (N) N.D. N.D. -1.3 -0.2 N.D.
stress Def A22 0.015 mg/ml N.D. N.D. -1.4 +0.0 N.D.
stress Def Cephalothin 0.08 mg/ml N.D. N.D. -1.3 -0.1 N.D.
stress Def 2-Furfuraldehyde 0.032 vol% N.D. N.D. -0.3 -1.0 N.D.
stress Thallium(I) acetate 0.09 mg/ml N.D. N.D. -1.0 -0.3 N.D.
carbon source propionate (C) N.D. N.D. -1.0 -0.2 N.D.
stress Def Doxycycline hyclate 0.0002 mg/ml N.D. N.D. -1.4 +0.2 N.D.
carbon source D-Fructose (C) N.D. N.D. -1.4 +0.2 N.D.
stress Thallium(I) acetate 0.1 mg/ml N.D. N.D. -1.2 +0.1 N.D.
stress Def Benzalkonium Chloride 0.002 mg/ml N.D. N.D. +0.3 -0.9 N.D.
carbon source RCH2 defined media N.D. N.D. +0.3 -0.9 N.D.
stress Def Polymyxin B sulfate 0.00008 mg/ml N.D. N.D. +0.8 -0.7 N.D.
stress Def Polymyxin B sulfate 0.0001 mg/ml N.D. N.D. +0.8 -0.6 N.D.
stress Cephalothin 0.04 mg/ml N.D. N.D. +1.2 -0.3 N.D.
nitrogen source nitrite (N) N.D. N.D. +1.3 -0.4 N.D.
stress Fusidic 0.016 mg/ml N.D. N.D. +1.1 -0.1 N.D.
stress Def Thallium(I) acetate 0.125 mg/ml N.D. N.D. +1.3 -0.3 N.D.
RCH2 grown on a colony of 8R2A N.D. N.D. +0.8 +0.4 N.D.
stress Def Carbenicillin 0.008 mg/ml N.D. N.D. +1.5 -0.3 N.D.
stress L-Lysine 200 mM N.D. N.D. +1.2 +0.1 N.D.
stress L-Lysine 200 mM N.D. N.D. +1.2 +0.3 N.D.
stress Bacitracin 0.25 mg/ml N.D. N.D. +2.1 +0.0 N.D.
stress Bacitracin 0.25 mg/ml N.D. N.D. +2.0 +0.3 N.D.
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