Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3739 and Psest_3740 overlap by 4 nucleotidesPsest_3740 and Psest_3741 are separated by 68 nucleotidesPsest_3741 and Psest_3742 overlap by 25 nucleotidesPsest_3742 and Psest_3743 are separated by 104 nucleotides Psest_3739: Psest_3739 - Small-conductance mechanosensitive channel, at 3,910,405 to 3,910,986 _3739 Psest_3740: Psest_3740 - ATPase components of ABC transporters with duplicated ATPase domains, at 3,910,983 to 3,912,893 _3740 Psest_3741: Psest_3741 - TIGR02444 family protein, at 3,912,962 to 3,913,438 _3741 Psest_3742: Psest_3742 - hypothetical protein, at 3,913,414 to 3,914,244 _3742 Psest_3743: Psest_3743 - Regulator of sigma D, at 3,914,349 to 3,914,816 _3743
Group Condition Psest_3739 Psest_3740 Psest_3741 Psest_3742 Psest_3743
stress Polymyxin B sulfate 0.0001 mg/ml -0.7 -0.9 N.D. -0.4 -0.3
stress Cephalothin 0.04 mg/ml -1.1 +0.0 N.D. +0.1 -1.3
stress Lactate-nitrate; anaerobic; copper stress sample1 -0.5 -0.5 N.D. -0.6 -0.5
stress Def Benzalkonium Chloride 0.002 mg/ml -1.4 +0.0 N.D. +0.2 -0.9
stress sodium fluoride 6.25 mM -0.9 -0.5 N.D. -0.4 -0.2
stress Gentamicin 0.0016 mg/ml -0.2 -0.2 N.D. -0.6 -0.9
stress Choline chloride 90 mM -0.5 -0.8 N.D. -0.4 -0.2
stress Choline Lysine 20 mM -0.2 -0.4 N.D. -0.6 -0.6
radiation Ionizing radiation, 319.06 Gy, -0.6 -0.2 N.D. -0.7 -0.4
stress Def 2-Furfuraldehyde 0.032 vol% -0.9 +0.2 N.D. -0.8 -0.2
nitrogen source L-Isoleucine (N) -0.5 -0.3 N.D. -0.5 -0.5
stress Paraquat dichloride 0.015 mg/ml -0.3 -0.2 N.D. -0.7 -0.5
stress Choline chloride 90 mM +0.4 -0.6 N.D. -0.7 -0.4
nitrogen source L-Valine (N) +0.2 +0.0 N.D. -0.5 -0.9
stress syringaldehyde 3 mM +0.3 -0.4 N.D. -0.8 -0.2
stress Lactate-nitrate; anaerobic; copper stress sample2 +0.4 -0.3 N.D. -0.7 -0.3
RCH2 grown on a colony of Serratia -0.6 -0.4 N.D. +0.8 -0.1
nitrogen source nitrite (N) -0.2 -0.2 N.D. -0.5 +0.8
carbon source L-Alanine (C) -0.7 -0.1 N.D. +0.5 +0.4
nitrogen source L-Glutamic (N) +0.5 +0.5 N.D. -0.4 -0.4
RCH2 grown on a colony of ecoli +1.1 -0.2 N.D. -0.1 -0.6
stress L-Lysine 200 mM -0.3 -0.1 N.D. +0.2 +1.2
carbon source D-Fructose (C) +0.3 -0.4 N.D. +0.7 +0.7
RCH2 grown on a colony of N2C3 +0.2 +0.1 N.D. +0.4 +0.9
stress perchlorate 25 mM +0.6 +0.4 N.D. +0.2 +0.5
RCH2 grown on a colony of N2A2 +0.3 +0.4 N.D. +0.2 +0.8
carbon source propionate (C) +0.3 +0.2 N.D. +0.7 +0.7
RCH2 grown on a colony of N2F3 +0.7 +0.3 N.D. +0.5 +0.6
stress Def Carbenicillin 0.02 mg/ml +0.8 +0.5 N.D. -0.0 +1.0
stress Furfuryl Alcohol 0.05 vol% +0.9 +0.8 N.D. +0.3 +0.9
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