Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0361 and Psest_0362 overlap by 1 nucleotidesPsest_0362 and Psest_0363 are separated by 58 nucleotidesPsest_0363 and Psest_0364 are separated by 78 nucleotidesPsest_0364 and Psest_0365 are separated by 41 nucleotides Psest_0361: Psest_0361 - TRAP transporter, DctM subunit, at 387,496 to 388,776 _0361 Psest_0362: Psest_0362 - TRAP-type C4-dicarboxylate transport system, small permease component, at 388,776 to 389,303 _0362 Psest_0363: Psest_0363 - tripartite ATP-independent periplasmic transporter solute receptor, DctP family, at 389,362 to 390,333 _0363 Psest_0364: Psest_0364 - Gluconolactonase, at 390,412 to 391,302 _0364 Psest_0365: Psest_0365 - NAD dependent epimerase/dehydratase family., at 391,344 to 392,159 _0365
Group Condition Psest_0361 Psest_0362 Psest_0363 Psest_0364 Psest_0365
stress Def A22 0.015 mg/ml -0.6 -1.0 -0.5 -0.5 -0.5
stress Def Carbenicillin 0.008 mg/ml -0.5 -0.4 -0.0 -0.6 -0.7
stress 5-Hydroxymethylfurfural 5 mM -0.2 -0.5 -0.3 -0.7 -0.3
nitrogen source nitrite (N) -0.3 -0.0 -0.4 -0.2 -0.9
stress Nalidixic 0.00390625 mg/ml -0.8 -0.3 +0.1 -0.5 -0.3
nitrogen source L-Alanine (N) -0.4 -0.3 -0.5 -0.1 -0.4
RCH2 grown on a colony of N2F3 +0.1 -0.2 -0.9 -0.1 -0.3
stress Def Dimethyl Sulfoxide 5 vol% -0.2 -0.5 -1.0 +0.2 +0.2
stress L-Lysine 200 mM -0.4 +0.5 -0.7 -0.3 -0.2
stress Furfuryl Alcohol 0.05 vol% +0.1 -1.0 +0.2 -0.4 +0.1
stress Thallium(I) acetate 0.09 mg/ml -0.4 +0.1 +0.3 -0.5 -0.4
stress L-Lysine 200 mM +0.2 +0.1 -0.9 -0.4 +0.1
carbon source L-tyrosine (C) +0.1 +0.2 -0.4 +0.3 -0.7
stress Choline Lysine 20 mM +0.2 +0.4 -0.7 -0.6 +0.3
stress Def Carbenicillin 0.02 mg/ml -0.5 +0.1 -0.7 +0.3 +0.4
stress Doxycycline hyclate 0.0002 mg/ml +0.1 -0.5 +0.7 -0.7 +0.1
stress Nickel (II) chloride 0.9 mM -0.5 +0.3 +0.3 -0.3 +0.3
carbon source Glucose defined media -0.0 -0.3 +0.5 -0.5 +0.3
stress D-Cycloserine 0.032 mg/ml +0.2 -0.6 +0.7 -0.0 -0.2
RCH2 grown on a colony of Serratia -0.4 -0.2 +0.4 +1.1 -0.7
temperature LB 30C timecourse1 timepoint 1 -0.2 -0.4 +0.8 -0.1 +0.2
stress Polymyxin B sulfate 0.0001 mg/ml -0.0 -0.7 +0.6 -0.1 +0.6
carbon source D-Gluconic Acid (C) +0.2 -0.8 +0.2 +0.3 +0.4
stress Nickel (II) chloride 0.8 mM -0.1 +0.6 -0.5 +0.1 +0.4
RCH2 grown on a colony of 8R2A +0.1 -0.6 +0.8 +0.3 +0.3
stress A22 0.005 mg/ml +0.1 +0.6 +0.6 -0.2 -0.1
stress A22 0.002 mg/ml -0.3 +0.6 +0.7 +0.3 +0.1
stress D-Cycloserine 0.032 mg/ml +0.4 -0.1 +0.9 +0.3 +0.2
nitrogen source L-Glutamic (N) +0.3 +0.6 +0.2 +0.1 +0.5
nitrogen source L-Isoleucine (N) +0.4 +0.3 +0.6 +0.2 +0.3
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