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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_3669 and Psest_3670 overlap by 4 nucleotides
Psest_3670 and Psest_3671 overlap by 4 nucleotides
Psest_3671 and Psest_3672 are separated by 270 nucleotides
Psest_3672 and Psest_3673 are separated by 81 nucleotides
Psest_3669: Psest_3669 - Uncharacterized protein affecting Mg2+/Co2+ transport, at 3,833,445 to 3,833,828
_3669
Psest_3670: Psest_3670 - bis(5'-nucleosyl)-tetraphosphatase (symmetrical), at 3,833,825 to 3,834,652
_3670
Psest_3671: Psest_3671 - Rhodanese-related sulfurtransferase, at 3,834,649 to 3,834,978
_3671
Psest_3672: Psest_3672 - Putative Ser protein kinase, at 3,835,249 to 3,837,171
_3672
Psest_3673: Psest_3673 - Uncharacterized conserved protein, at 3,837,253 to 3,838,524
_3673
Group
Condition
Psest
_3669
Psest
_3670
Psest
_3671
Psest
_3672
Psest
_3673
carbon source
Glycolic Acid (C)
-0.3
-1.7
-0.3
-0.6
-0.6
stress
Def Chloride 400 mM
+0.1
-3.1
-0.2
+0.1
-0.2
carbon source
L-Isoleucine (C)
+0.0
-3.3
+0.0
-0.1
-0.1
carbon source
Glycolic Acid (C)
-0.2
-1.8
+0.1
-0.7
-0.7
stress
Def Dimethyl Sulfoxide 5 vol%
-0.1
-2.5
-0.2
-0.1
-0.1
carbon source
L-Isoleucine (C)
-0.2
-2.6
+0.2
-0.0
-0.2
RCH2 grown on a colony of Serratia
-0.9
-1.7
+0.3
+0.2
-0.5
stress
1-ethyl-3-methylimidazolium acetate 40 mM
-0.2
-2.2
+0.0
-0.2
+0.1
nitrogen source
L-Citrulline (N)
+0.2
-0.7
-0.2
-0.7
-0.8
carbon source
L-Leucine (C)
+0.3
-3.0
+0.5
+0.2
+0.1
carbon source
L-Leucine (C)
-0.1
-2.3
+0.4
+0.3
+0.0
stress
acetate 80 mM
+0.4
-2.5
+0.1
+0.1
+0.2
carbon source
propionate (C)
+0.3
+2.3
-0.4
-1.9
-1.4
RCH2 grown on a colony of Serratia
-0.1
-1.5
+0.6
+0.1
-0.3
carbon source
propionate (C)
+0.2
+1.7
+0.1
-1.2
-1.5
stress
nitrate 250 mM
-0.2
+1.6
-1.1
-0.3
-0.4
stress
Paraquat dichloride 0.015 mg/ml
-0.4
+2.0
+0.5
-0.2
-0.4
stress
Nickel (II) chloride 0.9 mM
-0.4
+2.0
+0.2
-0.1
-0.1
stress
Gentamicin 0.0016 mg/ml
+0.4
+1.7
-0.0
-0.3
-0.2
stress
Phosphomycin 0.012 mg/ml
-0.1
+2.2
-0.1
+0.1
+0.1
stress
Phosphomycin 0.012 mg/ml
-0.1
+2.2
+0.0
-0.0
+0.3
stress
Nickel (II) chloride 1 mM
+0.3
+2.4
+0.2
-0.0
+0.0
stress
Choline Lysine 20 mM
+0.4
+2.3
+0.2
+0.1
+0.1
stress
Choline chloride 90 mM
+0.6
+2.4
-0.0
+0.2
-0.1
stress
Furfuryl Alcohol 0.05 vol%
+0.1
+1.8
+0.5
+0.6
+0.2
carbon source
butyrate (C)
+0.2
+3.3
-0.1
+0.0
+0.0
carbon source
L-tyrosine (C)
+0.3
+3.8
-0.4
-0.0
+0.1
stress
Bacitracin 0.25 mg/ml
+0.4
+3.5
+0.0
+0.0
+0.1
stress
Bacitracin 0.25 mg/ml
+0.2
+3.3
+0.5
+0.1
+0.1
carbon source
L-tyrosine (C)
+0.6
+4.0
+0.0
-0.1
+0.0
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