Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0359 and Psest_0360 are separated by 57 nucleotidesPsest_0360 and Psest_0361 are separated by 223 nucleotidesPsest_0361 and Psest_0362 overlap by 1 nucleotidesPsest_0362 and Psest_0363 are separated by 58 nucleotides Psest_0359: Psest_0359 - Transcriptional regulators, at 385,560 to 386,312 _0359 Psest_0360: Psest_0360 - Predicted permease, DMT superfamily, at 386,370 to 387,272 _0360 Psest_0361: Psest_0361 - TRAP transporter, DctM subunit, at 387,496 to 388,776 _0361 Psest_0362: Psest_0362 - TRAP-type C4-dicarboxylate transport system, small permease component, at 388,776 to 389,303 _0362 Psest_0363: Psest_0363 - tripartite ATP-independent periplasmic transporter solute receptor, DctP family, at 389,362 to 390,333 _0363
Group Condition Psest_0359 Psest_0360 Psest_0361 Psest_0362 Psest_0363
stress Def Cephalothin 0.08 mg/ml -4.6 -0.3 -0.6 -0.2 -0.1
carbon source D-Fructose (C) -4.7 -0.2 -0.2 -0.1 +0.1
carbon source L-tyrosine (C) -4.5 -0.4 +0.1 +0.2 -0.4
carbon source L-tyrosine (C) -4.4 -0.6 -0.1 +0.2 +0.0
carbon source D-Fructose (C) -4.5 +0.1 +0.1 -0.0 +0.1
stress Def A22 0.015 mg/ml -1.2 -0.9 -0.6 -1.0 -0.5
stress Def Fusidic 0.064 mg/ml -3.0 -0.0 -0.2 -0.5 -0.2
stress Def Carbenicillin 0.02 mg/ml -1.7 -0.9 -0.5 +0.1 -0.7
nitrogen source L-Alanine (N) -1.5 -0.4 -0.4 -0.3 -0.5
stress Def Dimethyl Sulfoxide 5 vol% -1.4 +0.1 -0.2 -0.5 -1.0
metal limitation Lactate-nitrite; anaerobic; sample3 -3.3 +0.1 +0.2 -0.0 +0.1
stress Furfuryl Alcohol 0.05 vol% -1.5 -0.8 +0.1 -1.0 +0.2
nitrogen source nitrite (N) -2.9 -0.2 -0.0 +0.2 +0.3
carbon source L-Glutamic (C) -2.5 +0.1 +0.1 -0.4 +0.2
stress Def Carbenicillin 0.008 mg/ml -2.0 +0.4 -0.5 -0.4 -0.0
stress D-Cycloserine 0.032 mg/ml -3.8 +0.3 +0.4 -0.1 +0.9
stress Choline Lysine 20 mM -2.0 -0.1 +0.2 +0.4 -0.7
stress D-Cycloserine 0.032 mg/ml -2.6 +0.0 +0.2 -0.6 +0.7
nitrogen source nitrite (N) -2.0 -0.2 +0.2 -0.6 +0.4
stress Def Cephalothin 0.04 mg/ml -2.5 +0.4 +0.2 -0.1 -0.1
carbon source D-Alanine (C) -1.7 +0.1 -0.1 -0.7 +0.4
stress Benzalkonium Chloride 0.002 mg/ml -3.3 +0.6 +0.4 +0.5 +0.1
stress Paraquat dichloride 0.015 mg/ml -2.0 -0.2 -0.1 +0.4 +0.2
stress Def 2-Furfuraldehyde 0.032 vol% -1.9 +0.3 -0.3 +0.4 +0.1
stress Def Chloride 400 mM -2.4 +0.6 +0.0 +0.5 -0.1
vitamin No vitamins t2 -1.8 -0.3 -0.0 +0.0 +0.7
nitrogen source Glycine (N) -1.9 +0.4 +0.2 +0.3 -0.2
stress nitrate 250 mM -2.5 +1.2 +0.0 +0.3 +0.2
stress nitrate 200 mM -2.3 +0.6 -0.0 +0.9 +0.6
RCH2 grown on a colony of N2C3 +2.5 +0.4 -0.2 -0.2 -0.7
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