Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3662 and Psest_3663 are separated by 1 nucleotidesPsest_3663 and Psest_3664 overlap by 4 nucleotidesPsest_3664 and Psest_3665 are separated by 90 nucleotidesPsest_3665 and Psest_3666 overlap by 26 nucleotides Psest_3662: Psest_3662 - DnaJ-domain-containing proteins 1, at 3,824,733 to 3,825,500 _3662 Psest_3663: Psest_3663 - Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon), at 3,825,502 to 3,826,173 _3663 Psest_3664: Psest_3664 - Predicted phosphotransferase related to Ser/Thr protein kinases, at 3,826,170 to 3,827,228 _3664 Psest_3665: Psest_3665 - Organic solvent tolerance protein OstA, at 3,827,319 to 3,830,111 _3665 Psest_3666: Psest_3666 - Parvulin-like peptidyl-prolyl isomerase, at 3,830,086 to 3,831,399 _3666
Group Condition Psest_3662 Psest_3663 Psest_3664 Psest_3665 Psest_3666
temperature Glucose defined 30C timecourse1 timepoint 3 -0.8 N.D. -3.1 N.D. N.D.
temperature Glucose defined media 26C sample1 -1.6 N.D. -2.0 N.D. N.D.
temperature Glucose defined media 37C sample1 -1.2 N.D. -1.8 N.D. N.D.
carbon source Glucose defined media -1.1 N.D. -1.6 N.D. N.D.
temperature Glucose defined 30C timecourse1 timepoint 2 -1.0 N.D. -1.6 N.D. N.D.
stress Def Neomycin 0.0008 mg/ml -0.8 N.D. -1.8 N.D. N.D.
stress Neomycin 0.004 mg/ml +0.6 N.D. -3.1 N.D. N.D.
temperature LB 30C timecourse1 timepoint 1 -0.6 N.D. -1.7 N.D. N.D.
carbon source Glucose defined media -0.5 N.D. -1.8 N.D. N.D.
temperature LB 30C timecourse1 timepoint 2 -0.9 N.D. -1.3 N.D. N.D.
stress Dimethyl Sulfoxide 5 vol% +0.4 N.D. -2.5 N.D. N.D.
stress Chlorite 0.06 mM +0.5 N.D. -2.4 N.D. N.D.
temperature LB 30C timecourse1 timepoint 3 -0.6 N.D. -1.3 N.D. N.D.
lb LB -0.4 N.D. -1.4 N.D. N.D.
carbon source D-Alanine (C) +0.1 N.D. -1.8 N.D. N.D.
carbon source L-Proline (C) +0.2 N.D. -1.7 N.D. N.D.
stress Gentamicin 0.0016 mg/ml +0.6 N.D. -1.8 N.D. N.D.
stress Def Nalidixic 0.001 mg/ml +0.6 N.D. -1.4 N.D. N.D.
stress nitrate 250 mM +1.0 N.D. -1.6 N.D. N.D.
stress Doxycycline hyclate 0.0002 mg/ml -1.3 N.D. +0.7 N.D. N.D.
stress Cephalothin 0.04 mg/ml +0.9 N.D. -1.4 N.D. N.D.
nitrogen source Glycine (N) +0.8 N.D. -1.3 N.D. N.D.
stress Benzethonium chloride 0.0125 mM -1.2 N.D. +1.2 N.D. N.D.
carbon source propionate (C) -2.3 N.D. +2.3 N.D. N.D.
stress Choline Lysine 20 mM -0.6 N.D. +1.3 N.D. N.D.
stress Choline Lysine 20 mM -0.6 N.D. +1.6 N.D. N.D.
stress Nalidixic 0.00390625 mg/ml -0.1 N.D. +1.7 N.D. N.D.
nitrogen source L-Alanine (N) +0.5 N.D. +1.3 N.D. N.D.
stress Nalidixic 0.00390625 mg/ml +0.7 N.D. +1.9 N.D. N.D.
carbon source propionate (C) +0.2 N.D. +2.9 N.D. N.D.
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