Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3624 and Psest_3625 are separated by 25 nucleotidesPsest_3625 and Psest_3626 are separated by 141 nucleotidesPsest_3626 and Psest_3627 are separated by 25 nucleotidesPsest_3627 and Psest_3628 overlap by 4 nucleotides Psest_3624: Psest_3624 - tRNA_Gly_TCC, at 3,787,789 to 3,787,862 _3624 Psest_3625: Psest_3625 - tRNA_Tyr_GTA, at 3,787,888 to 3,787,972 _3625 Psest_3626: Psest_3626 - hypothetical protein, at 3,788,114 to 3,788,791 _3626 Psest_3627: Psest_3627 - pantothenate kinase, type III, at 3,788,817 to 3,789,557 _3627 Psest_3628: Psest_3628 - birA, biotin-[acetyl-CoA-carboxylase] ligase region, at 3,789,554 to 3,790,501 _3628
Group Condition Psest_3624 Psest_3625 Psest_3626 Psest_3627 Psest_3628
stress Fusidic 0.016 mg/ml N.D. N.D. -2.5 N.D. N.D.
stress Gentamicin 0.0016 mg/ml N.D. N.D. -2.2 N.D. N.D.
stress nitrate 250 mM N.D. N.D. -2.1 N.D. N.D.
stress methylglyoxal 0.0016 vol% N.D. N.D. -1.5 N.D. N.D.
nitrogen source nitrite (N) N.D. N.D. -1.4 N.D. N.D.
temperature Glucose defined 30C timecourse1 timepoint 3 N.D. N.D. -1.4 N.D. N.D.
temperature Glucose defined media 37C sample1 N.D. N.D. -1.3 N.D. N.D.
temperature LB 30C timecourse1 timepoint 1 N.D. N.D. -1.3 N.D. N.D.
stress A22 0.002 mg/ml N.D. N.D. -1.3 N.D. N.D.
temperature Glucose defined 30C timecourse1 timepoint 2 N.D. N.D. -1.3 N.D. N.D.
carbon source Glucose defined media N.D. N.D. -1.2 N.D. N.D.
carbon source Glucose defined media N.D. N.D. -1.2 N.D. N.D.
temperature Glucose defined 30C timecourse1 timepoint 1 N.D. N.D. -1.2 N.D. N.D.
temperature Glucose defined media 26C sample1 N.D. N.D. -1.1 N.D. N.D.
nitrogen source nitrate (N) N.D. N.D. -1.1 N.D. N.D.
temperature LB 30C timecourse1 timepoint 2 N.D. N.D. -1.1 N.D. N.D.
temperature LB 30C timecourse2 timepoint 2 N.D. N.D. -1.1 N.D. N.D.
stress A22 0.002 mg/ml N.D. N.D. -1.0 N.D. N.D.
stress Benzalkonium Chloride 0.002 mg/ml N.D. N.D. -1.0 N.D. N.D.
stress Nalidixic 0.001 mg/ml N.D. N.D. -1.0 N.D. N.D.
temperature LB 30C timecourse2 timepoint 1 N.D. N.D. -1.0 N.D. N.D.
lb LB N.D. N.D. -0.9 N.D. N.D.
temperature LB 30C timecourse1 timepoint 3 N.D. N.D. -0.9 N.D. N.D.
temperature LB 26C sample1 N.D. N.D. -0.9 N.D. N.D.
nitrogen source Parabanic Acid (N) N.D. N.D. -0.9 N.D. N.D.
carbon source L-tyrosine (C) N.D. N.D. +1.3 N.D. N.D.
carbon source L-tyrosine (C) N.D. N.D. +1.3 N.D. N.D.
stress Def Carbenicillin 0.008 mg/ml N.D. N.D. +1.3 N.D. N.D.
stress Carbenicillin 0.008 mg/ml N.D. N.D. +2.5 N.D. N.D.
stress Carbenicillin 0.008 mg/ml N.D. N.D. +2.7 N.D. N.D.
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