Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3571 and Psest_3572 are separated by 71 nucleotidesPsest_3572 and Psest_3573 overlap by 8 nucleotidesPsest_3573 and Psest_3574 are separated by 10 nucleotidesPsest_3574 and Psest_3575 are separated by 164 nucleotides Psest_3571: Psest_3571 - Outer membrane protein W, at 3,745,477 to 3,746,154 _3571 Psest_3572: Psest_3572 - Nucleoside-diphosphate-sugar epimerases, at 3,746,226 to 3,747,149 _3572 Psest_3573: Psest_3573 - dTDP-4-dehydrorhamnose reductase, at 3,747,142 to 3,748,026 _3573 Psest_3574: Psest_3574 - single stranded DNA-binding protein (ssb), at 3,748,037 to 3,748,531 _3574 Psest_3575: Psest_3575 - Arabinose efflux permease, at 3,748,696 to 3,750,063 _3575
Group Condition Psest_3571 Psest_3572 Psest_3573 Psest_3574 Psest_3575
stress nitrite 2.5 mM -0.4 N.D. -0.3 N.D. -2.9
stress Choline Lysine 20 mM +0.0 N.D. -2.9 N.D. -0.7
stress Choline Lysine 20 mM -0.6 N.D. -2.2 N.D. -0.5
carbon source D-Maltose (C) +0.0 N.D. -2.7 N.D. -0.5
carbon source D-Maltose (C) -0.1 N.D. -2.7 N.D. -0.3
carbon source D-Maltose (C) +0.1 N.D. -2.6 N.D. -0.2
carbon source D-Lactate (C) -0.4 N.D. -1.7 N.D. -0.3
stress nitrite 2.5 mM -0.1 N.D. +0.5 N.D. -2.6
stress nitrite 2.5 mM +0.1 N.D. +0.2 N.D. -2.1
stress Def methylglyoxal 0.01 vol% +1.0 N.D. -2.3 N.D. -0.5
nitrogen source nitrite (N) +0.3 N.D. -1.1 N.D. -0.9
carbon source RCH2 defined media +0.4 N.D. -1.5 N.D. -0.6
stress Def Polymyxin B sulfate 0.0001 mg/ml +0.9 N.D. -1.7 N.D. -0.7
nitrogen source L-Isoleucine (N) +0.7 N.D. -1.5 N.D. -0.5
stress Nickel (II) chloride 0.8 mM -0.2 N.D. +1.2 N.D. -1.2
stress Chlorate 75 mM -0.0 N.D. +1.3 N.D. -1.3
stress Gentamicin 0.0016 mg/ml +0.3 N.D. +1.4 N.D. -1.0
stress Polymyxin B sulfate 0.0001 mg/ml -0.5 N.D. +2.2 N.D. -0.6
stress methylglyoxal 0.0016 vol% -0.5 N.D. +2.8 N.D. -0.2
stress Benzalkonium Chloride 0.002 mg/ml -0.3 N.D. +2.6 N.D. -0.2
stress Bacitracin 0.25 mg/ml +0.1 N.D. +1.1 N.D. +1.3
stress Cephalothin 0.04 mg/ml +0.4 N.D. +1.8 N.D. +0.2
stress Nalidixic 0.00390625 mg/ml +0.6 N.D. +0.1 N.D. +2.1
carbon source propionate (C) -0.3 N.D. +2.7 N.D. +0.4
stress Fusidic 0.016 mg/ml +0.2 N.D. +1.8 N.D. +1.0
stress Chlorite 0.06 mM -0.2 N.D. +1.9 N.D. +1.6
carbon source propionate (C) -0.0 N.D. +4.1 N.D. -0.5
stress Nalidixic 0.00390625 mg/ml +0.0 N.D. +0.5 N.D. +3.1
stress Furfuryl Alcohol 0.05 vol% -0.1 N.D. +4.5 N.D. -0.3
stress Def Benzalkonium Chloride 0.002 mg/ml +0.5 N.D. +2.8 N.D. +1.7
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