Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_3570 and Psest_3571 are separated by 183 nucleotidesPsest_3571 and Psest_3572 are separated by 71 nucleotidesPsest_3572 and Psest_3573 overlap by 8 nucleotidesPsest_3573 and Psest_3574 are separated by 10 nucleotides Psest_3570: Psest_3570 - Protein of unknown function (DUF3450)., at 3,744,508 to 3,745,293 _3570 Psest_3571: Psest_3571 - Outer membrane protein W, at 3,745,477 to 3,746,154 _3571 Psest_3572: Psest_3572 - Nucleoside-diphosphate-sugar epimerases, at 3,746,226 to 3,747,149 _3572 Psest_3573: Psest_3573 - dTDP-4-dehydrorhamnose reductase, at 3,747,142 to 3,748,026 _3573 Psest_3574: Psest_3574 - single stranded DNA-binding protein (ssb), at 3,748,037 to 3,748,531 _3574
Group Condition Psest_3570 Psest_3571 Psest_3572 Psest_3573 Psest_3574
stress Choline Lysine 20 mM N.D. +0.0 N.D. -2.9 N.D.
stress Choline Lysine 20 mM N.D. -0.6 N.D. -2.2 N.D.
carbon source D-Maltose (C) N.D. -0.1 N.D. -2.7 N.D.
carbon source D-Maltose (C) N.D. +0.0 N.D. -2.7 N.D.
carbon source D-Maltose (C) N.D. +0.1 N.D. -2.6 N.D.
carbon source D-Lactate (C) N.D. -0.4 N.D. -1.7 N.D.
stress Def Carbenicillin 0.02 mg/ml N.D. -0.3 N.D. -1.6 N.D.
stress acetate 80 mM N.D. -0.4 N.D. -1.4 N.D.
temperature Glucose defined 30C timecourse1 timepoint 3 N.D. -0.2 N.D. -1.5 N.D.
nitrogen source L-Glutamic (N) N.D. -0.0 N.D. -1.6 N.D.
stress Anaerobic 500 uM Zinc chloride sample1 N.D. -1.8 N.D. +0.2 N.D.
stress Def methylglyoxal 0.01 vol% N.D. +1.0 N.D. -2.3 N.D.
nitrogen source nitrate (N) N.D. +0.4 N.D. -1.5 N.D.
carbon source RCH2 defined media N.D. +0.4 N.D. -1.5 N.D.
anaerobic Nitrite/ lactate media with Nitrite 20mM N.D. +0.4 N.D. -1.4 N.D.
nitrogen source L-Isoleucine (N) N.D. +0.7 N.D. -1.5 N.D.
stress Def Polymyxin B sulfate 0.0001 mg/ml N.D. +0.9 N.D. -1.7 N.D.
stress Def 2-Furfuraldehyde 0.032 vol% N.D. +0.9 N.D. -1.0 N.D.
stress Lactate-nitrate; anaerobic; dichromate stress sample3 N.D. -0.4 N.D. +1.6 N.D.
stress Polymyxin B sulfate 0.0001 mg/ml N.D. -0.5 N.D. +2.2 N.D.
stress Gentamicin 0.0016 mg/ml N.D. +0.3 N.D. +1.4 N.D.
stress Chlorite 0.06 mM N.D. -0.2 N.D. +1.9 N.D.
stress Fusidic 0.016 mg/ml N.D. +0.2 N.D. +1.8 N.D.
stress Cephalothin 0.04 mg/ml N.D. +0.4 N.D. +1.8 N.D.
stress methylglyoxal 0.0016 vol% N.D. -0.5 N.D. +2.8 N.D.
carbon source propionate (C) N.D. -0.3 N.D. +2.7 N.D.
stress Benzalkonium Chloride 0.002 mg/ml N.D. -0.3 N.D. +2.6 N.D.
stress Def Benzalkonium Chloride 0.002 mg/ml N.D. +0.5 N.D. +2.8 N.D.
carbon source propionate (C) N.D. -0.0 N.D. +4.1 N.D.
stress Furfuryl Alcohol 0.05 vol% N.D. -0.1 N.D. +4.5 N.D.
remove
Psest_3570
plot		 remove
Psest_3571
plot		 remove
Psest_3572		 remove
Psest_3573
plot		 remove
Psest_3574
plot