Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3560 and Psest_3561 are separated by 107 nucleotidesPsest_3561 and Psest_3562 are separated by 16 nucleotidesPsest_3562 and Psest_3563 are separated by 3 nucleotidesPsest_3563 and Psest_3564 are separated by 8 nucleotides Psest_3560: Psest_3560 - hypothetical protein, at 3,736,761 to 3,737,111 _3560 Psest_3561: Psest_3561 - Protein of unknown function (DUF2796)., at 3,737,219 to 3,737,836 _3561 Psest_3562: Psest_3562 - ABC-type antimicrobial peptide transport system, ATPase component, at 3,737,853 to 3,738,560 _3562 Psest_3563: Psest_3563 - ABC-type transport system, involved in lipoprotein release, permease component, at 3,738,564 to 3,739,829 _3563 Psest_3564: Psest_3564 - Uncharacterized protein conserved in bacteria, at 3,739,838 to 3,740,350 _3564
Group Condition Psest_3560 Psest_3561 Psest_3562 Psest_3563 Psest_3564
stress nitrate 250 mM N.D. -0.5 -2.9 +0.7 -1.2
stress Benzethonium chloride 0.01 mM N.D. -0.7 -0.4 -0.5 -0.6
stress Polymyxin B sulfate 0.0001 mg/ml N.D. -0.4 -1.2 -0.5 -0.2
stress nitrate 200 mM N.D. -0.7 -0.2 -0.8 -0.3
stress Nickel (II) chloride 0.9 mM N.D. +0.1 -1.7 -0.2 -0.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 N.D. -0.4 -0.9 -0.3 -0.3
stress sodium fluoride 6.25 mM N.D. -0.8 +0.1 -0.4 -0.5
carbon source Ethanol (C) N.D. +0.1 -1.4 -0.2 -0.2
stress Cholin acetate 40 mM N.D. -0.7 -0.7 +0.1 -0.2
carbon source propionate (C) N.D. -0.9 -0.5 +0.5 -0.5
stress Cisplatin 0.0016 mg/ml N.D. -0.3 +0.3 -0.7 -0.7
RCH2 grown on a colony of N2F3 N.D. +0.0 -1.6 -0.0 +0.2
radiation Ionizing radiation, 0 Gy N.D. -0.1 -1.1 +0.3 -0.4
stress sodium fluoride 8.5 mM N.D. -0.5 -0.4 +0.3 -0.7
RCH2 grown on a colony of 8R2A N.D. +0.4 -0.9 +0.5 -1.2
stress Choline chloride 90 mM N.D. -0.7 -0.3 -0.5 +0.3
stress A22 0.005 mg/ml N.D. -0.4 -0.6 +0.5 -0.5
nutrient L-tyrosine N.D. +0.1 -0.7 +0.3 -0.6
nitrogen source nitrite (N) N.D. -0.4 -0.6 +0.5 -0.4
stress Def Carbenicillin 0.008 mg/ml N.D. -0.2 -0.6 +0.6 -0.5
stress Aluminum chloride 0.3 mM N.D. -0.6 +0.4 +0.4 -0.5
RCH2 grown on a colony of N2C3 N.D. +0.5 -1.0 +0.5 -0.1
RCH2 grown on a colony of Serratia N.D. +0.6 -0.3 +0.3 -0.5
stress Benzalkonium Chloride 0.002 mg/ml N.D. +0.1 +0.9 +0.1 -0.9
stress Vanillin 2 mM N.D. -0.4 +0.6 -0.5 +0.5
stress Lactate-nitrate; anaerobic sample1 N.D. +0.2 +1.0 -0.1 +0.4
nitrogen source L-Citrulline (N) N.D. +0.8 -0.5 +0.7 +0.7
stress Vanillin 2 mM N.D. +0.2 +1.4 +0.3 +0.2
stress methylglyoxal 0.0016 vol% N.D. +0.6 +1.0 +0.8 -0.3
stress Furfuryl Alcohol 0.05 vol% N.D. +0.8 +0.5 +1.6 -0.1
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