Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3516 and Psest_3517 are separated by 145 nucleotidesPsest_3517 and Psest_3518 are separated by 241 nucleotidesPsest_3518 and Psest_3519 are separated by 236 nucleotidesPsest_3519 and Psest_3520 are separated by 111 nucleotides Psest_3516: Psest_3516 - Leucine dehydrogenase (EC 1.4.1.9) (from data), at 3,692,956 to 3,694,050 _3516 Psest_3517: Psest_3517 - branched-chain ketoacid ferredoxin reductase (EC 1.2.7.7) active on 4-methyl-2-oxopentanoate, (S)-3-methyl-2-oxopentanoate, or 3-methyl-2-oxobutanoate (from data), at 3,694,196 to 3,697,666 _3517 Psest_3518: Psest_3518 - Transcriptional regulators, at 3,697,908 to 3,698,378 _3518 Psest_3519: Psest_3519 - Uncharacterized conserved protein, at 3,698,615 to 3,699,031 _3519 Psest_3520: Psest_3520 - Short chain fatty acids transporter, at 3,699,143 to 3,700,483 _3520
Group Condition Psest_3516 Psest_3517 Psest_3518 Psest_3519 Psest_3520
carbon source L-Leucine (C) -7.2 -5.9 -3.9 -0.3 -0.0
carbon source L-Leucine (C) -4.7 -5.5 -3.9 -0.4 -0.2
carbon source L-Isoleucine (C) -3.7 -5.7 -4.0 +0.1 -0.1
carbon source L-Isoleucine (C) -3.5 -5.6 -3.9 +0.2 -0.1
RCH2 grown on a colony of Serratia -1.0 -0.7 -2.7 -1.4 -1.3
RCH2 grown on a colony of ecoli -0.8 -1.9 -3.6 -0.3 +0.2
RCH2 grown on a colony of ecoli -1.8 -2.1 -2.0 -0.0 +0.2
nitrogen source L-Valine (N) +0.2 -2.6 -2.3 -0.8 -0.2
RCH2 grown on a colony of N2F3 +0.5 +0.1 -3.6 -1.9 -0.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -0.7 -0.6 -3.6 +0.7 -0.7
nitrogen source L-Valine (N) +0.6 -2.9 -1.9 -0.1 +0.0
nitrogen source L-Isoleucine (N) -0.2 -1.0 -2.2 -0.4 -0.2
nitrogen source L-Isoleucine (N) -0.7 -1.5 -2.0 +0.3 -0.0
stress nitrate 200 mM +0.2 +0.1 -1.6 -1.3 -1.0
RCH2 grown on a colony of N2A2 -0.3 -0.3 -1.1 -2.1 +0.3
stress perchlorate 25 mM -0.2 +0.1 -1.2 -1.2 -0.7
stress Cobalt chloride 0.07 mM -0.1 -0.2 -1.1 -1.7 -0.0
stress nitrite 2.5 mM +0.2 -0.1 -1.3 -1.2 -0.3
carbon source L-tyrosine (C) -0.4 +0.1 +0.2 -2.5 -0.1
RCH2 grown on a colony of N2A2 +0.6 -0.5 -2.1 -0.0 -0.3
stress Paraquat dichloride 0.015 mg/ml +0.4 +0.1 -2.0 -1.0 +0.2
stress Benzethonium chloride 0.01 mM +0.1 -0.1 -1.8 -0.4 +0.7
stress Nalidixic 0.00390625 mg/ml +0.1 +0.1 -2.3 +0.3 +0.3
carbon source propionate (C) -0.9 +0.0 +1.1 -0.9 -0.4
stress nitrate 250 mM +0.8 +0.0 +1.0 -2.8 +0.2
nutrient Min media with glucose +0.6 +0.1 -1.6 +0.6 -0.1
RCH2 grown on a colony of Serratia -1.0 -1.2 +1.6 +0.3 -0.2
lb LB +0.2 +0.2 +2.1 -1.1 -0.6
stress Paraquat dichloride 0.015 mg/ml -0.5 -0.1 +2.2 +0.2 -0.2
stress acetate 80 mM +0.1 +0.2 +1.8 +1.1 +0.2
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