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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_3509 and Psest_3510 are separated by 232 nucleotides
Psest_3510 and Psest_3511 are separated by 81 nucleotides
Psest_3511 and Psest_3512 overlap by 11 nucleotides
Psest_3512 and Psest_3513 overlap by 1 nucleotides
Psest_3509: Psest_3509 - Methyl-accepting chemotaxis protein, at 3,683,341 to 3,685,230
_3509
Psest_3510: Psest_3510 - Na+-dependent transporters of the SNF family, at 3,685,463 to 3,686,923
_3510
Psest_3511: Psest_3511 - Maleylacetoacetate isomerase (EC 5.2.1.2)
(from data)
, at 3,687,005 to 3,687,664
_3511
Psest_3512: Psest_3512 - fumarylacetoacetate (FAA) hydrolase (EC 3.7.1.2)
(from data)
, at 3,687,654 to 3,688,637
_3512
Psest_3513: Psest_3513 - Homogentisate 1,2-dioxygenase (EC 1.13.11.5)
(from data)
, at 3,688,637 to 3,689,776
_3513
Group
Condition
Psest
_3509
Psest
_3510
Psest
_3511
Psest
_3512
Psest
_3513
carbon source
L-tyrosine (C)
-0.2
-3.8
-4.1
-4.5
-4.7
carbon source
L-tyrosine (C)
-0.0
-3.7
-4.4
-4.5
-4.2
nutrient
L-tyrosine
+0.0
-0.3
-3.6
-5.3
-0.4
RCH2 grown on a colony of ecoli
+0.3
-0.4
-1.8
-6.3
-0.8
RCH2 grown on a colony of ecoli
-0.1
-0.8
-1.9
-5.2
-0.1
nutrient
L-tyrosine
+0.0
-0.3
-2.9
-4.3
-0.3
stress
D-Cycloserine 0.032 mg/ml
+0.2
-5.0
-0.6
-0.3
+0.3
stress
D-Cycloserine 0.032 mg/ml
-0.5
-4.0
-0.9
+0.1
+0.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-0.0
-0.4
-0.8
-1.9
-0.9
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-0.3
-0.0
-1.0
-1.8
-0.5
RCH2 grown on a colony of N2A2
+0.5
-0.3
-0.8
-2.0
-0.7
stress
Bacitracin 0.25 mg/ml
-0.2
-1.9
-0.7
-0.2
-0.2
stress
Furfuryl Alcohol 0.05 vol%
+0.1
-1.3
-0.3
-0.1
-1.4
RCH2 grown on a colony of Serratia
+0.1
-0.5
-0.0
-1.2
-1.2
stress
nitrate 200 mM
+0.5
-3.1
-0.1
+0.2
-0.2
RCH2 grown on a colony of N2A2
+0.3
-0.1
-1.1
-1.2
-0.3
stress
Chloride 200 mM
-0.0
-2.1
-0.2
-0.1
+0.1
stress
Bacitracin 0.25 mg/ml
-0.3
-1.2
-0.5
-0.3
-0.1
carbon source
casaminos (C)
+0.1
+0.3
-1.5
-1.1
+0.0
stress
Chloride 200 mM
+0.1
-2.0
-0.4
-0.2
+0.4
RCH2 grown on a colony of N2F3
+0.1
+0.2
-1.3
-0.5
-0.4
carbon source
casaminos (C)
+0.1
+0.5
-2.0
-0.8
+0.4
stress
Paraquat dichloride 0.015 mg/ml
+0.3
-1.8
-0.2
-0.1
+0.6
stress
nitrate 200 mM
+0.2
-2.1
-0.6
+0.1
+1.5
stress
Chlorate 75 mM
+0.0
-1.6
+0.1
+0.9
-0.1
RCH2 grown on a colony of 8R2A
+0.3
-0.3
-1.1
-0.9
+1.4
stress
Cephalothin 0.04 mg/ml
+0.4
-1.2
-0.4
+0.5
+0.1
stress
nitrate 250 mM
+0.3
-0.8
+0.1
+0.5
-0.7
vitamin
No vitamins t1
-0.4
-0.2
-0.7
+0.5
+0.5
stress
A22 0.005 mg/ml
-0.0
-0.5
+0.9
+1.7
+0.3
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