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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_3503 and Psest_3504 are separated by 98 nucleotides
Psest_3504 and Psest_3505 are separated by 184 nucleotides
Psest_3505 and Psest_3506 are separated by 205 nucleotides
Psest_3506 and Psest_3507 are separated by 98 nucleotides
Psest_3503: Psest_3503 - hypothetical protein, at 3,675,154 to 3,677,052
_3503
Psest_3504: Psest_3504 - Predicted acyltransferases, at 3,677,151 to 3,678,218
_3504
Psest_3505: Psest_3505 - Superfamily II DNA and RNA helicases, at 3,678,403 to 3,679,728
_3505
Psest_3506: Psest_3506 - Kef-type K+ transport system, predicted NAD-binding component, at 3,679,934 to 3,681,622
_3506
Psest_3507: Psest_3507 - FOG: EAL domain, at 3,681,721 to 3,682,533
_3507
Group
Condition
Psest
_3503
Psest
_3504
Psest
_3505
Psest
_3506
Psest
_3507
stress
Benzethonium chloride 0.0125 mM
-0.2
-0.0
-1.5
+0.0
-1.3
stress
Choline chloride 90 mM
-0.3
+0.4
-2.0
+0.1
-0.7
stress
nitrate 200 mM
+0.1
-0.0
-1.2
+0.2
-1.2
stress
nitrate 250 mM
-0.0
-0.9
-0.6
-0.0
-0.3
stress
Nalidixic 0.00390625 mg/ml
-0.2
+0.1
-0.5
-0.3
-1.0
stress
Nickel (II) chloride 0.9 mM
-0.2
-0.2
-0.3
+0.1
-1.1
RCH2 grown on a colony of N2A2
-0.1
+0.0
-0.5
-0.3
-0.9
stress
Choline chloride 90 mM
-0.1
+0.1
-0.8
-0.2
-0.6
RCH2 grown on a colony of N2C3
+0.1
+0.3
-0.2
-0.2
-1.6
stress
Chlorate 75 mM
+0.1
-0.0
-0.4
-0.5
-0.6
stress
Def Carbenicillin 0.008 mg/ml
-0.0
-1.0
-0.4
-0.3
+0.2
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.1
-0.7
+0.5
-0.5
-0.7
stress
Benzethonium chloride 0.01 mM
+0.0
+0.2
-1.0
+0.1
-0.5
stress
Carbenicillin 0.0065 mg/ml
-0.4
+0.1
-0.6
+0.2
-0.3
stress
Cholin acetate 40 mM
-0.2
-0.1
+0.1
+0.3
-1.0
stress
Phosphomycin 0.012 mg/ml
+0.1
+0.0
-1.2
-0.1
+0.2
nitrogen source
nitrite (N)
+0.1
-0.5
-0.3
-0.4
+0.4
stress
perchlorate 25 mM
+0.2
+0.1
-0.6
+0.1
-0.6
RCH2 grown on a colony of ecoli
-0.0
+0.2
+0.4
-0.1
-1.1
anaerobic
Nitrate/ lactate media with Nitrate 20mM and .05mM Tungsten
-0.1
+0.3
+0.3
+0.0
-1.0
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-0.2
+0.1
+0.5
-0.1
-0.8
carbon source
RCH2 defined media
+0.2
-0.5
-0.3
-0.2
+0.4
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.2
-0.5
+0.6
-0.4
+0.2
stress
Choline Lysine 20 mM
+0.1
+0.0
-1.1
+0.0
+0.7
RCH2 grown on a colony of ecoli
+0.2
+0.1
+0.4
+0.2
-0.7
anaerobic
nitrate reduction - anaerobic
+0.2
-0.4
+0.6
-0.2
+0.3
stress
Phosphomycin 0.012 mg/ml
+0.4
+0.4
-0.8
+0.3
+0.5
RCH2 grown on a colony of Serratia
-0.3
+0.1
+0.9
+0.4
-0.1
RCH2 grown on a colony of 8R2A
+0.4
-0.3
-0.4
+0.4
+1.0
stress
sodium fluoride 8.5 mM
-0.1
+0.3
+0.6
+0.0
+0.7
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