Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3488 and Psest_3489 are separated by 15 nucleotidesPsest_3489 and Psest_3490 are separated by 241 nucleotidesPsest_3490 and Psest_3491 overlap by 23 nucleotidesPsest_3491 and Psest_3492 are separated by 169 nucleotides Psest_3488: Psest_3488 - Universal stress protein UspA and related nucleotide-binding proteins, at 3,660,875 to 3,661,333 _3488 Psest_3489: Psest_3489 - hypothetical protein, at 3,661,349 to 3,662,950 _3489 Psest_3490: Psest_3490 - Signal transduction histidine kinase, nitrate/nitrite-specific, at 3,663,192 to 3,665,195 _3490 Psest_3491: Psest_3491 - Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain, at 3,665,173 to 3,665,781 _3491 Psest_3492: Psest_3492 - hypothetical protein, at 3,665,951 to 3,666,736 _3492
Group Condition Psest_3488 Psest_3489 Psest_3490 Psest_3491 Psest_3492
stress Lactate-nitrate; anaerobic; copper stress sample1 -3.5 -3.7 -4.1 N.D. -0.2
stress Lactate-nitrate; anaerobic; copper stress sample3 -2.4 -4.1 -3.9 N.D. -0.6
stress Anaerobic 500 uM Zinc chloride sample1 -3.1 -3.8 -3.5 N.D. +0.1
stress Lactate-nitrate; anaerobic; copper stress sample2 -2.5 -4.1 -3.4 N.D. -0.4
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample1 -3.2 -3.0 -3.4 N.D. -0.0
stress Lactate-nitrate; anaerobic; cadmium stress sample3 -2.0 -2.2 -4.3 N.D. -0.0
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample2 -3.1 -2.7 -2.1 N.D. -0.4
stress Anaerobic 500 uM Zinc chloride sample2 -2.6 -3.3 -2.3 N.D. +0.1
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample3 -3.0 -2.9 -2.7 N.D. +0.5
stress Anaerobic 500 uM Zinc chloride sample3 -2.5 -3.7 -1.8 N.D. +0.2
stress Lactate-nitrate; anaerobic; cadmium stress sample2 -1.1 -2.1 -4.5 N.D. +0.4
carbon source Anaerobic, Glucose Nitrate sample1 -2.9 -2.1 -1.7 N.D. -0.3
metal limitation Anaerobic, 1 nM Mo, 500 nM W sample1 -1.9 -2.3 -2.6 N.D. +0.2
stress Lactate-nitrate; anaerobic; nickel stress sample1 -2.4 -2.2 -1.8 N.D. -0.1
stress Lactate-nitrate; anaerobic; cadmium stress sample1 -0.9 -2.0 -3.7 N.D. +0.4
stress Lactate-nitrate; anaerobic; nickel stress sample3 -1.9 -2.1 -2.0 N.D. +0.2
metal limitation Anaerobic, 1 nM Mo, 500 nM W sample1 -1.8 -2.0 -1.9 N.D. -0.0
metal limitation Anaerobic, 1 nM Mo, 500 nM W sample2 -1.5 -2.2 -2.2 N.D. +0.2
carbon source Anaerobic, Glucose Nitrate sample3 -1.9 -1.9 -1.8 N.D. -0.1
metal limitation Anaerobic, 100 nM, Mo 1 mM W sample3 -1.2 -1.9 -2.3 N.D. -0.2
stress Lactate-nitrate; anaerobic; cobalt stress sample3 -1.0 -1.6 -2.8 N.D. -0.1
carbon source Anaerobic, Glucose Nitrate sample2 -1.9 -1.7 -1.9 N.D. +0.1
anaerobic Nitrate/ lactate media with Nitrate 250mM -1.6 -1.5 -1.8 N.D. -0.5
anaerobic nitrate reduction - anaerobic -2.0 -1.9 -1.7 N.D. +0.4
stress Lactate-nitrate; anaerobic; dichromate stress sample3 -1.9 +1.9 +2.0 N.D. -0.2
stress perchlorate 12.5 mM +2.3 +2.6 +2.8 N.D. -0.4
stress Chlorate 75 mM +0.2 +3.6 +3.2 N.D. +1.6
stress perchlorate 12.5 mM +3.1 +2.5 +3.1 N.D. +0.3
stress Def Chlorate 20 mM +2.7 +4.4 +4.7 N.D. +0.9
stress Def Chlorate 40 mM +2.7 +4.5 +4.4 N.D. +1.3
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