Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0341 and Psest_0342 are separated by 24 nucleotidesPsest_0342 and Psest_0343 overlap by 4 nucleotidesPsest_0343 and Psest_0344 are separated by 135 nucleotidesPsest_0344 and Psest_0345 are separated by 181 nucleotides Psest_0341: Psest_0341 - flavoprotein, HI0933 family, at 362,768 to 363,952 _0341 Psest_0342: Psest_0342 - ABC-type amino acid transport/signal transduction systems, periplasmic component/domain, at 363,977 to 364,843 _0342 Psest_0343: Psest_0343 - hypothetical membrane protein, TIGR01666, at 364,840 to 367,038 _0343 Psest_0344: Psest_0344 - Superfamily II DNA and RNA helicases, at 367,174 to 368,553 _0344 Psest_0345: Psest_0345 - Uncharacterized protein conserved in archaea, at 368,735 to 369,244 _0345
Group Condition Psest_0341 Psest_0342 Psest_0343 Psest_0344 Psest_0345
stress Polymyxin B sulfate 0.0001 mg/ml -0.4 -0.1 -1.0 -0.5 -1.2
stress nitrate 250 mM -0.1 -0.5 -0.2 -0.6 -1.0
stress sodium fluoride 6.25 mM +0.1 -0.1 -0.7 -0.3 -0.4
stress Def 2-Furfuraldehyde 0.032 vol% +0.2 -0.5 +0.2 -0.3 -0.9
stress Cobalt chloride 0.06 mM +0.0 -0.2 +0.0 -0.9 -0.3
stress nitrate 200 mM -0.1 +0.2 -0.4 -0.7 -0.1
temperature LB 26C sample1 +0.2 -0.1 -0.4 -0.5 -0.4
stress Def Chloride 400 mM +0.1 +0.0 -0.1 -0.6 -0.5
RCH2 grown on a colony of N2C3 -0.2 +0.1 -0.4 -0.5 +0.3
stress Chloride 200 mM +0.4 -0.1 -0.3 -0.6 +0.1
stress Nalidixic 0.00390625 mg/ml -0.2 -0.2 +0.3 +0.3 -0.5
anaerobic nitrate reduction - anaerobic +0.4 -0.4 +0.2 -0.1 -0.4
stress Cephalothin 0.04 mg/ml +0.4 -0.5 +0.5 -0.3 -0.4
stress Fusidic 0.016 mg/ml +0.5 -0.5 +0.3 -0.1 -0.4
RCH2 grown on a colony of N2F3 -0.1 +0.0 -0.7 +0.7 +0.2
stress Gentamicin 0.0016 mg/ml +0.5 -0.3 +0.3 -0.1 -0.3
carbon source propionate (C) -0.7 +0.2 +0.4 +0.6 -0.2
carbon source propionate (C) -0.2 +0.7 +0.5 -0.6 -0.1
stress Def Benzalkonium Chloride 0.002 mg/ml +0.7 -0.3 +0.2 +0.1 -0.3
carbon source RCH2 defined media +0.3 -0.3 +0.7 -0.1 -0.2
carbon source butyrate (C) +0.6 -0.2 +0.3 -0.2 +0.2
stress Carbenicillin 0.008 mg/ml -0.4 +0.0 +0.1 +0.7 +0.4
stress Def Carbenicillin 0.008 mg/ml +0.3 +0.0 +1.1 -0.1 -0.4
stress Choline Lysine 20 mM +0.3 +0.3 +0.5 +0.2 +0.2
stress Choline Lysine 20 mM +0.3 +0.1 +0.6 +0.2 +0.2
nitrogen source nitrite (N) +0.3 -0.2 +0.6 +0.7 -0.1
lb LB +0.4 +0.4 +0.4 +0.2 +0.3
stress Vanillin 2 mM +0.2 +0.3 +0.3 +0.5 +0.4
stress Def Carbenicillin 0.02 mg/ml +0.1 +0.3 +0.6 +0.6 +0.4
stress Furfuryl Alcohol 0.05 vol% +0.3 +0.5 -0.2 +1.0 +0.8
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