Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3462 and Psest_3463 are separated by 2 nucleotidesPsest_3463 and Psest_3464 are separated by 81 nucleotidesPsest_3464 and Psest_3465 overlap by 11 nucleotidesPsest_3465 and Psest_3466 are separated by 108 nucleotides Psest_3462: Psest_3462 - Lipopolysaccharide kinase (Kdo/WaaP) family., at 3,632,649 to 3,633,368 _3462 Psest_3463: Psest_3463 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 3,633,371 to 3,634,048 _3463 Psest_3464: Psest_3464 - Signal transduction histidine kinase, at 3,634,130 to 3,635,407 _3464 Psest_3465: Psest_3465 - Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain, at 3,635,397 to 3,636,080 _3465 Psest_3466: Psest_3466 - Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily, at 3,636,189 to 3,638,147 _3466
Group Condition Psest_3462 Psest_3463 Psest_3464 Psest_3465 Psest_3466
stress Aluminum chloride 0.3 mM -3.9 -3.3 -1.5 -3.3 -0.6
stress Aluminum chloride 0.3 mM -2.7 -2.0 -1.5 -3.2 -0.6
stress Def Vancomycin 0.008 mg/ml -0.3 +0.1 -1.8 -0.0 +0.2
stress Def Carbenicillin 0.008 mg/ml +0.9 -0.0 -2.5 +0.4 -0.5
stress Thallium(I) acetate 0.08 mg/ml -1.0 -0.3 +0.0 -0.5 +0.3
stress Nalidixic 0.00390625 mg/ml +0.3 -0.4 -1.0 -0.6 +0.3
RCH2 grown on a colony of N2C3 -1.1 -0.1 +0.4 -0.8 +0.3
RCH2 grown on a colony of Serratia -0.8 -0.4 -0.2 +0.4 -0.2
stress Def Vancomycin 0.016 mg/ml +0.2 +0.1 -1.6 +0.3 +0.1
stress Def methylglyoxal 0.01 vol% +0.4 -0.1 -1.2 +0.4 -0.1
stress Def Doxycycline hyclate 0.0002 mg/ml +0.6 +0.0 -1.4 +0.3 -0.1
stress Def Cephalothin 0.08 mg/ml +0.2 +0.4 -1.6 +0.4 +0.2
stress Def Nalidixic 0.0005 mg/ml +0.2 +0.4 -1.4 +0.4 +0.1
stress Def Cephalothin 0.04 mg/ml +0.4 +0.1 -1.1 +0.4 -0.0
stress Bacitracin 0.25 mg/ml +0.2 +0.2 -0.7 +0.6 -0.3
stress Nalidixic 0.00390625 mg/ml +0.6 +0.1 -0.9 +0.2 +0.1
carbon source L-tyrosine (C) +0.1 -0.3 +0.8 -0.6 +0.3
stress Def Benzalkonium Chloride 0.002 mg/ml +1.2 +0.6 -1.5 +0.6 -0.1
stress Def Polymyxin B sulfate 0.0001 mg/ml +0.8 +0.3 -0.5 +0.3 -0.1
stress Def Polymyxin B sulfate 0.00008 mg/ml +1.0 +0.2 -0.4 +0.3 -0.3
stress Cephalothin 0.04 mg/ml +1.1 +0.1 -0.6 +0.5 -0.1
stress Def Nalidixic 0.001 mg/ml +0.8 +0.7 -1.5 +0.9 +0.3
stress Chlorate 75 mM +0.1 +0.3 -0.5 +1.1 +0.5
RCH2 grown on a colony of N2A2 +0.5 +0.9 -0.0 -0.2 +0.3
stress Lactate-nitrate; anaerobic; cadmium stress sample2 +1.0 -0.2 +0.4 +0.3 +0.2
carbon source L-tyrosine (C) -0.1 -0.1 +1.1 +0.7 +0.1
stress Lactate-nitrate; anaerobic; nickel stress sample2 +0.4 -0.3 +0.4 +0.9 +0.4
stress Def Benzethonium chloride 0.008 mM +1.1 +0.8 -0.6 +0.9 -0.1
stress Def Neomycin 0.0008 mg/ml -0.7 -1.3 +5.5 -0.7 -0.3
stress nitrate 250 mM +0.9 +0.7 +1.1 +0.5 +0.1
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