Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3456 and Psest_3457 overlap by 8 nucleotidesPsest_3457 and Psest_3458 overlap by 4 nucleotidesPsest_3458 and Psest_3459 are separated by 92 nucleotidesPsest_3459 and Psest_3460 are separated by 13 nucleotides Psest_3456: Psest_3456 - RNA polymerase sigma factor, sigma-70 family, at 3,628,078 to 3,628,638 _3456 Psest_3457: Psest_3457 - hypothetical protein, at 3,628,631 to 3,629,056 _3457 Psest_3458: Psest_3458 - hypothetical protein, at 3,629,053 to 3,629,517 _3458 Psest_3459: Psest_3459 - hypothetical protein, at 3,629,610 to 3,630,092 _3459 Psest_3460: Psest_3460 - Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily, at 3,630,106 to 3,632,232 _3460
Group Condition Psest_3456 Psest_3457 Psest_3458 Psest_3459 Psest_3460
stress Nalidixic 0.00390625 mg/ml -4.7 N.D. -0.7 +0.7 +0.2
stress Def A22 0.015 mg/ml -1.3 N.D. -1.7 -0.5 -0.7
stress Choline chloride 90 mM -1.4 N.D. -2.9 +0.0 +0.0
stress Paraquat dichloride 0.015 mg/ml -1.0 N.D. -2.9 -0.4 +0.2
stress nitrite 2.5 mM +0.7 N.D. -3.6 -0.9 -0.2
RCH2 grown on a colony of 8R2A -3.3 N.D. -0.9 -0.0 +0.4
stress nitrate 200 mM -0.9 N.D. -3.3 +0.4 +0.2
nitrogen source L-Citrulline (N) -2.2 N.D. -1.4 +0.1 -0.1
carbon source Glucose defined media -1.1 N.D. -0.8 -1.5 +0.1
stress Choline Lysine 20 mM +0.2 N.D. -3.6 +0.1 +0.0
temperature LB 30C timecourse2 timepoint 2 -1.9 N.D. -0.6 -0.9 +0.3
stress L-Lysine 200 mM -1.5 N.D. -2.1 +0.2 +0.2
RCH2 grown on a colony of Serratia -2.1 N.D. -1.5 +0.4 +0.3
stress nitrite 2.5 mM +0.8 N.D. -2.3 -1.1 -0.1
stress Def Phosphomycin 0.125 mg/ml -2.4 N.D. +0.2 +0.3 -0.8
radiation Ionizing radiation, 319.06 Gy, -3.0 N.D. -0.0 +0.4 -0.0
carbon source butyrate (C) -0.0 N.D. -3.0 +0.4 +0.1
stress Def Chlorate 20 mM -2.6 N.D. +0.7 -0.1 +0.1
stress Def Chlorate 40 mM -2.9 N.D. +0.9 -0.0 +0.2
carbon source butyrate (C) +0.9 N.D. -2.5 +0.0 -0.1
stress A22 0.005 mg/ml -2.6 N.D. -0.2 +1.3 -0.1
stress nitrate 250 mM -2.2 N.D. -0.7 +1.1 +0.4
temperature LB 30C timecourse2 timepoint 1 -2.5 N.D. -0.1 +0.7 +0.5
stress D-Cycloserine 0.032 mg/ml +1.3 N.D. -1.6 -0.6 +0.1
stress Polymyxin B sulfate 0.0001 mg/ml -2.2 N.D. +0.3 +0.6 +0.6
stress Gentamicin 0.0016 mg/ml +1.3 N.D. -1.0 +0.8 +0.4
stress Fusidic 0.016 mg/ml +1.9 N.D. -0.9 +2.0 +0.4
carbon source propionate (C) +1.6 N.D. +2.1 -0.2 +0.1
stress Chlorate 75 mM +0.9 N.D. +1.0 +2.1 +0.8
stress Def 2-Furfuraldehyde 0.032 vol% +1.5 N.D. +2.4 +0.7 +0.4
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