Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3443 and Psest_3444 are separated by 128 nucleotidesPsest_3444 and Psest_3445 overlap by 4 nucleotidesPsest_3445 and Psest_3446 overlap by 4 nucleotidesPsest_3446 and Psest_3447 are separated by 198 nucleotides Psest_3443: Psest_3443 - Predicted acyltransferases, at 3,613,560 to 3,614,798 _3443 Psest_3444: Psest_3444 - Aerobic-type carbon monoxide dehydrogenase, large subunit CoxL/CutL homologs, at 3,614,927 to 3,617,128 _3444 Psest_3445: Psest_3445 - Aerobic-type carbon monoxide dehydrogenase, middle subunit CoxM/CutM homologs, at 3,617,125 to 3,618,111 _3445 Psest_3446: Psest_3446 - Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs, at 3,618,108 to 3,618,620 _3446 Psest_3447: Psest_3447 - Uncharacterized MobA-related protein, at 3,618,819 to 3,619,409 _3447
Group Condition Psest_3443 Psest_3444 Psest_3445 Psest_3446 Psest_3447
stress Def Chloride 400 mM -0.4 -0.4 -0.4 N.D. -1.3
stress Nalidixic 0.00390625 mg/ml -0.3 +0.1 -0.1 N.D. -2.1
stress Carbenicillin 0.0065 mg/ml +0.0 -0.1 -0.1 N.D. -2.2
nitrogen source L-Isoleucine (N) -0.0 -0.1 -0.9 N.D. -1.2
stress acetate 80 mM -0.7 +0.1 -0.3 N.D. -1.2
stress Cisplatin 0.003 mg/ml -0.3 -0.2 -0.2 N.D. -1.4
stress Polymyxin B sulfate 0.0001 mg/ml -0.2 -0.5 -0.6 N.D. -0.7
anaerobic Nitrate/ lactate media with Nitrate 20mM +0.0 +0.0 -0.1 N.D. -1.8
stress Spectinomycin 0.00625 mg/ml +0.2 -0.1 -0.1 N.D. -1.7
temperature Glucose defined media 37C sample1 +0.3 -0.0 -0.1 N.D. -1.7
stress syringaldehyde 4 mM -0.2 -0.1 +0.3 N.D. -1.5
RCH2 grown on a colony of Serratia +0.4 +0.1 -0.5 N.D. -1.5
carbon source L-Proline (C) -0.1 +0.2 +0.5 N.D. -1.3
nitrogen source nitrite (N) -0.2 +0.9 -0.4 N.D. -1.0
RCH2 grown on a colony of N2C3 +0.4 +0.3 -0.0 N.D. -1.2
stress Cephalothin 0.04 mg/ml +0.1 +0.6 +0.0 N.D. -1.2
stress Def Chlorate 40 mM -0.5 -0.2 -0.7 N.D. +1.2
stress Furfuryl Alcohol 0.05 vol% +0.3 +0.1 +0.7 N.D. -1.0
stress Def sodium fluoride 25 mM -0.3 -0.3 -0.1 N.D. +1.2
stress Doxycycline hyclate 0.0002 mg/ml -0.3 -0.4 +0.1 N.D. +1.4
stress A22 0.002 mg/ml -0.3 +0.2 +0.1 N.D. +1.3
stress Benzethonium chloride 0.01 mM -0.1 +0.3 +0.1 N.D. +1.4
nitrogen source L-Proline (N) -0.0 +0.0 +0.2 N.D. +1.6
stress Def Polymyxin B sulfate 0.00008 mg/ml +0.0 +0.6 +0.7 N.D. +0.7
RCH2 grown on a colony of 8R2A +0.5 +0.0 -0.1 N.D. +1.5
stress Lactate-nitrate; anaerobic; nickel stress sample3 +0.2 +0.3 +0.0 N.D. +1.5
stress Def Lomefloxacin 0.00004 mM +0.1 +0.0 +0.3 N.D. +1.7
stress Def Carbenicillin 0.02 mg/ml -0.1 +0.2 +0.6 N.D. +1.3
nitrogen source nitrate (N) +0.1 +0.1 +0.3 N.D. +1.6
stress Gentamicin 0.0016 mg/ml +0.1 +0.5 +0.5 N.D. +2.0
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