Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_3417 and Psest_3418 are separated by 7 nucleotidesPsest_3418 and Psest_3419 are separated by 188 nucleotidesPsest_3419 and Psest_3420 are separated by 2 nucleotidesPsest_3420 and Psest_3421 are separated by 248 nucleotides Psest_3417: Psest_3417 - hypothetical protein, at 3,587,264 to 3,587,779 _3417 Psest_3418: Psest_3418 - tRNA nucleotidyltransferase (CCA-adding enzyme), at 3,587,787 to 3,588,752 _3418 Psest_3419: Psest_3419 - Predicted transcriptional regulators, at 3,588,941 to 3,589,264 _3419 Psest_3420: Psest_3420 - Predicted Zn peptidase, at 3,589,267 to 3,590,157 _3420 Psest_3421: Psest_3421 - hypothetical protein, at 3,590,406 to 3,590,579 _3421
Group Condition Psest_3417 Psest_3418 Psest_3419 Psest_3420 Psest_3421
stress Def Carbenicillin 0.008 mg/ml -0.6 -0.9 -2.3 -1.2 +0.3
stress Chlorate 75 mM -0.7 -0.4 -0.7 -0.8 -2.0
stress Def Chloride 400 mM +0.0 +0.2 -4.1 +0.1 -0.8
temperature LB 30C timecourse1 timepoint 3 -0.5 -0.6 -1.4 -0.6 -0.5
stress Def Carbenicillin 0.02 mg/ml -0.9 -0.8 -1.3 -0.4 -0.1
metal limitation Aerobic, no iron sample3 -0.6 -0.6 +0.3 -1.4 -0.5
carbon source butyrate (C) -0.0 -0.0 -2.1 -0.3 -0.2
stress Gentamicin 0.0016 mg/ml -0.3 -0.5 -1.0 -0.9 -0.0
metal limitation Aerobic, no iron sample2 -0.5 -0.6 +0.4 -1.5 -0.3
temperature LB 30C timecourse2 timepoint 1 -0.3 -0.4 -1.0 -0.5 -0.4
metal limitation Aerobic, no iron sample1 -0.5 -0.7 +0.2 -1.4 -0.2
metal limitation Lactate-nitrite; anaerobic; sample3 -0.3 -0.4 -1.1 -0.3 -0.3
RCH2 grown on a colony of N2F3 -0.0 -0.7 -0.9 +0.0 -0.9
carbon source RCH2 defined media -0.3 -0.4 -1.4 -0.7 +0.4
stress Def Polymyxin B sulfate 0.00008 mg/ml -0.3 -0.4 -1.5 -0.5 +0.5
nitrogen source L-Glutamic (N) +0.1 -0.0 -0.6 +0.1 -1.8
stress Furfuryl Alcohol 0.05 vol% -0.5 -0.5 -0.7 +0.2 -0.6
stress Def Polymyxin B sulfate 0.0001 mg/ml -0.5 -0.2 -1.4 -0.4 +0.5
stress Vanillin 2 mM +0.3 -0.1 -1.1 +0.3 -1.4
stress D-Cycloserine 0.032 mg/ml +0.4 +0.2 -0.8 -0.3 -1.2
stress Fusidic 0.016 mg/ml -0.3 -0.2 -0.6 -0.9 +0.4
stress Cephalothin 0.04 mg/ml -0.3 -0.3 -0.4 -0.9 +0.6
stress 5-Hydroxymethylfurfural 5 mM +0.4 +0.1 -1.1 +0.2 -0.7
stress Def Benzethonium chloride 0.008 mM -0.2 -0.3 -0.5 -0.5 +0.9
stress Def 2-Furfuraldehyde 0.032 vol% +0.3 +0.4 -0.9 -0.4 +0.5
stress 2-Furfuraldehyde 0.05 vol% +0.2 +0.1 -1.1 +0.5 +0.6
stress nitrate 200 mM +0.2 -0.0 -0.8 +0.3 +1.1
stress Def Benzalkonium Chloride 0.002 mg/ml +0.4 +0.4 -0.3 -0.6 +1.0
stress Benzethonium chloride 0.01 mM +0.7 +0.4 +0.7 +0.1 -0.5
nitrogen source L-Isoleucine (N) +0.5 +0.6 -0.6 +0.6 +0.9
remove
Psest_3417
plot
remove
Psest_3418
plot
remove
Psest_3419
remove
Psest_3420
plot
remove
Psest_3421
plot