Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_0333 and Psest_0334 are separated by 60 nucleotidesPsest_0334 and Psest_0335 are separated by 319 nucleotidesPsest_0335 and Psest_0336 are separated by 177 nucleotidesPsest_0336 and Psest_0337 are separated by 92 nucleotides Psest_0333: Psest_0333 - fructose-bisphosphate aldolase, class II, Calvin cycle subtype, at 356,117 to 357,181 _0333 Psest_0334: Psest_0334 - Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 357,242 to 357,622 _0334 Psest_0335: Psest_0335 - Methylase involved in ubiquinone/menaquinone biosynthesis, at 357,942 to 358,556 _0335 Psest_0336: Psest_0336 - Protein of unknown function (DUF3509)., at 358,734 to 359,012 _0336 Psest_0337: Psest_0337 - Regulator of cell morphogenesis and NO signaling, at 359,105 to 359,578 _0337
Group Condition Psest_0333 Psest_0334 Psest_0335 Psest_0336 Psest_0337
RCH2 grown on a colony of ecoli N.D. -2.6 +0.1 N.D. -0.4
RCH2 grown on a colony of ecoli N.D. -2.6 -0.0 N.D. -0.3
stress Nalidixic 0.00390625 mg/ml N.D. -2.3 +0.0 N.D. -0.5
carbon source pyruvate (C) N.D. -2.5 -0.1 N.D. -0.1
RCH2 grown on a colony of Serratia N.D. -2.2 -0.3 N.D. -0.1
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample3 N.D. -1.9 -0.0 N.D. -0.5
stress Def Doxycycline hyclate 0.0002 mg/ml N.D. -2.3 -0.1 N.D. +0.1
stress Def Tetracycline 0.0004 mg/ml N.D. -2.2 -0.1 N.D. -0.0
stress Lactate-nitrate; anaerobic; copper stress sample3 N.D. -1.8 -0.1 N.D. -0.4
stress Lactate-nitrate; anaerobic; nickel stress sample2 N.D. -1.6 -0.1 N.D. -0.5
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample2 N.D. -1.3 -0.2 N.D. -0.5
stress Lactate-nitrate; anaerobic; dichromate stress sample2 N.D. -1.1 -0.2 N.D. -0.6
metal limitation Lactate-nitrite; anaerobic; sample3 N.D. -1.4 -0.2 N.D. -0.3
metal limitation Lactate-nitrite with YE; anaerobic; sample2 N.D. -1.5 -0.1 N.D. -0.4
radiation Ionizing radiation, 0 Gy N.D. -2.0 -0.0 N.D. +0.1
stress Def Fusidic 0.032 mg/ml N.D. -1.8 +0.1 N.D. -0.1
stress Lactate-nitrate; anaerobic; dichromate stress sample1 N.D. -1.4 -0.0 N.D. -0.4
metal limitation Lactate; aerobic; with copper, sample2 N.D. -1.7 +0.1 N.D. -0.3
stress Furfuryl Alcohol 0.05 vol% N.D. -1.1 +0.0 N.D. -0.7
carbon source succinate (C) N.D. -1.5 +0.0 N.D. -0.3
nitrogen source Parabanic Acid (N) N.D. -1.8 +0.0 N.D. +0.1
nitrogen source nitrite (N) N.D. -1.4 -0.3 N.D. +0.2
nitrogen source nitrate (N) N.D. -1.7 -0.1 N.D. +0.3
stress 5-Hydroxymethylfurfural 5 mM N.D. -1.7 +0.1 N.D. +0.4
stress Nickel (II) chloride 0.9 mM N.D. -1.5 +0.3 N.D. +0.1
stress Choline Lysine 20 mM N.D. -1.1 +0.7 N.D. +0.0
stress Choline chloride 90 mM N.D. -0.8 +0.8 N.D. +0.5
stress Choline chloride 90 mM N.D. +0.4 +1.5 N.D. +0.4
stress Cephalothin 0.04 mg/ml N.D. +1.1 +0.8 N.D. +0.6
nitrogen source nitrite (N) N.D. +2.0 +0.7 N.D. +0.6
remove
Psest_0333
plot		 remove
Psest_0334
plot		 remove
Psest_0335		 remove
Psest_0336
plot		 remove
Psest_0337
plot