Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_3395 and Psest_3396 are separated by 172 nucleotidesPsest_3396 and Psest_3397 are separated by 279 nucleotidesPsest_3397 and Psest_3398 are separated by 63 nucleotidesPsest_3398 and Psest_3399 are separated by 223 nucleotides Psest_3395: Psest_3395 - hypothetical protein, at 3,562,972 to 3,563,307 _3395 Psest_3396: Psest_3396 - Predicted ATP-dependent protease, at 3,563,480 to 3,565,921 _3396 Psest_3397: Psest_3397 - Cytochrome c peroxidase, at 3,566,201 to 3,567,229 _3397 Psest_3398: Psest_3398 - large conductance mechanosensitive channel protein, at 3,567,293 to 3,567,703 _3398 Psest_3399: Psest_3399 - Uncharacterized protein conserved in bacteria, at 3,567,927 to 3,568,196 _3399
Group Condition Psest_3395 Psest_3396 Psest_3397 Psest_3398 Psest_3399
RCH2 grown on a colony of Serratia -4.0 -0.2 +0.2 -0.1 -3.5
RCH2 grown on a colony of N2A2 -0.3 -0.1 +0.1 -1.2 -3.4
stress Nalidixic 0.00390625 mg/ml -2.5 +0.7 -0.3 +0.7 -2.6
RCH2 grown on a colony of N2C3 -0.0 +0.1 -0.4 -1.4 -2.2
stress acetate 80 mM -2.8 -0.2 +0.0 -0.7 +0.1
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -1.9 -0.1 +0.2 -0.1 -1.6
temperature LB 30C timecourse2 timepoint 2 -0.5 -0.1 -0.1 +0.2 -3.0
stress methylglyoxal 0.0016 vol% -4.2 +0.9 +0.1 -0.3 +0.1
nitrogen source Putrescine (N) -1.7 +0.1 -0.2 +0.2 -1.8
stress Cobalt chloride 0.07 mM -3.6 -0.4 -0.1 +0.2 +0.6
stress Nickel (II) chloride 0.8 mM -0.4 +0.2 +0.1 +0.3 -3.4
nutrient Min media with glucose -1.2 +0.1 -0.1 +0.3 -2.2
stress nitrate 200 mM -0.7 -0.4 +0.3 +0.6 -2.7
stress Furfuryl Alcohol 0.05 vol% -1.6 +0.6 -0.3 +0.7 -2.1
stress Choline chloride 90 mM +1.9 -0.5 +0.2 -0.7 -3.5
stress Nalidixic 0.00390625 mg/ml -1.4 +0.4 +0.3 -0.2 -1.6
stress Paraquat dichloride 0.015 mg/ml -3.3 +0.1 -0.1 +1.0 -0.1
stress Carbenicillin 0.008 mg/ml -3.9 -0.2 -0.2 +0.7 +1.2
carbon source acetate (C) +0.6 +0.1 +0.3 -0.0 -3.0
stress Spectinomycin 0.00625 mg/ml -2.7 -0.0 +0.2 -0.3 +1.0
carbon source Tween 20 (C) -2.7 +0.1 +0.0 -0.1 +1.0
stress Vancomycin 0.016 mg/ml +1.6 -0.4 -0.1 -0.7 -2.2
stress Benzethonium chloride 0.01 mM -1.5 +0.2 -0.1 -1.1 +0.9
stress benzoic 0.4 mg/ml -2.0 -0.4 +0.0 +0.2 +2.0
stress Fusidic 0.016 mg/ml +0.9 -1.0 +0.0 -0.8 +1.7
stress Fusidic 0.016 mg/ml +0.9 -1.5 +0.6 +0.7 +1.6
RCH2 grown on a colony of ecoli +1.2 -0.0 -0.2 -0.7 +2.2
stress Cephalothin 0.04 mg/ml +0.4 +0.1 +0.9 -0.5 +2.4
stress nitrate 200 mM +2.1 +0.2 +0.5 -0.3 +1.6
stress Def 2-Furfuraldehyde 0.032 vol% +1.9 -0.4 +0.6 +0.6 +1.6
remove
Psest_3395
plot
remove
Psest_3396
plot
remove
Psest_3397
remove
Psest_3398
plot
remove
Psest_3399
plot