Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3343 and Psest_3344 are separated by 14 nucleotidesPsest_3344 and Psest_3345 are separated by 102 nucleotidesPsest_3345 and Psest_3346 are separated by 142 nucleotidesPsest_3346 and Psest_3347 are separated by 287 nucleotides Psest_3343: Psest_3343 - Predicted periplasmic protein, at 3,508,652 to 3,509,161 _3343 Psest_3344: Psest_3344 - ABC-type Co2+ transport system, periplasmic component, at 3,509,176 to 3,510,051 _3344 Psest_3345: Psest_3345 - Sulfite reductase, alpha subunit (flavoprotein), at 3,510,154 to 3,511,680 _3345 Psest_3346: Psest_3346 - TonB-dependent siderophore receptor, at 3,511,823 to 3,513,895 _3346 Psest_3347: Psest_3347 - TonB-dependent siderophore receptor, at 3,514,183 to 3,516,441 _3347
Group Condition Psest_3343 Psest_3344 Psest_3345 Psest_3346 Psest_3347
stress nitrate 250 mM -1.5 -1.4 -0.6 -0.9 +0.5
stress Cobalt chloride 0.07 mM -1.8 -1.3 -0.8 -0.1 +0.2
stress nitrate 200 mM -2.0 -1.0 -0.2 +0.1 -0.0
stress Cobalt chloride 0.08 mM -0.3 -1.8 -1.1 -0.2 +0.3
stress Cobalt chloride 0.08 mM -0.8 -1.1 -1.3 -0.1 +0.3
stress Cobalt chloride 0.07 mM -1.0 -0.8 -0.9 -0.0 +0.3
RCH2 grown on a colony of N2F3 -1.7 -0.6 -0.2 +0.2 -0.0
stress Cobalt chloride 0.05 mM -0.5 -0.9 -0.6 -0.1 +0.2
stress nitrate 200 mM -0.7 -0.7 -0.3 -0.2 +0.1
stress Cobalt chloride 0.06 mM -0.4 -0.7 -0.7 +0.1 +0.1
stress Carbenicillin 0.0065 mg/ml -0.9 -0.3 -0.2 +0.1 -0.2
stress Polymyxin B sulfate 0.0001 mg/ml -0.2 -0.4 -0.6 -0.4 +0.1
RCH2 grown on a colony of N2C3 -1.0 -0.6 -0.1 +0.5 -0.1
stress Def Cephalothin 0.08 mg/ml -1.4 +0.1 -0.2 -0.0 +0.2
stress Cobalt chloride 0.05 mM -0.2 -0.6 -0.6 +0.0 +0.3
stress Carbenicillin 0.008 mg/ml -0.8 +0.2 -0.5 +0.2 +0.1
temperature LB 30C timecourse2 timepoint 2 -1.2 +0.3 +0.2 +0.1 +0.0
stress Paraquat dichloride 0.015 mg/ml +0.7 -0.3 -0.3 -0.6 -0.1
stress Def Neomycin 0.0008 mg/ml -0.8 -0.3 +0.3 +0.3 +0.2
RCH2 grown on a colony of Serratia +0.8 -0.4 -0.1 +0.5 -0.5
nitrogen source nitrite (N) +0.6 +0.2 +0.5 -0.5 +0.1
stress Fusidic 0.016 mg/ml +0.1 +0.7 +0.8 -0.8 +0.3
carbon source L-tyrosine (C) +0.7 +0.7 -0.1 -0.3 +0.3
RCH2 grown on a colony of N2A2 +1.1 +0.4 +0.1 +0.0 -0.0
stress L-Lysine 200 mM +0.3 +0.7 +0.5 +0.0 +0.5
stress Gentamicin 0.0016 mg/ml +0.7 +0.6 +0.4 +0.5 +0.4
stress L-Lysine 200 mM +0.5 +0.9 +0.6 +0.2 +0.4
stress Def Carbenicillin 0.02 mg/ml +1.2 -0.0 +0.8 +0.4 +0.3
stress Choline Lysine 20 mM +1.2 +0.7 +0.7 +0.1 +0.5
stress Choline Lysine 20 mM +1.1 +1.0 +0.5 +0.2 +0.5
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