Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3318 and Psest_3319 are separated by 112 nucleotidesPsest_3319 and Psest_3320 are separated by 75 nucleotidesPsest_3320 and Psest_3321 are separated by 2 nucleotidesPsest_3321 and Psest_3322 are separated by 40 nucleotides Psest_3318: Psest_3318 - Predicted Zn-dependent proteases and their inactivated homologs, at 3,480,266 to 3,481,612 _3318 Psest_3319: Psest_3319 - Uncharacterized protein conserved in bacteria, at 3,481,725 to 3,482,246 _3319 Psest_3320: Psest_3320 - Predicted Zn-dependent proteases and their inactivated homologs, at 3,482,322 to 3,483,764 _3320 Psest_3321: Psest_3321 - Predicted amidohydrolase, at 3,483,767 to 3,484,612 _3321 Psest_3322: Psest_3322 - TIGR02099 family protein, at 3,484,653 to 3,488,456 _3322
Group Condition Psest_3318 Psest_3319 Psest_3320 Psest_3321 Psest_3322
stress Def Benzethonium chloride 0.008 mM +0.5 -0.3 -0.2 -0.1 -6.1
carbon source D-Alanine (C) -0.0 +0.1 -0.1 -0.4 -5.4
stress Def Vancomycin 0.008 mg/ml -0.1 +0.1 -0.1 -0.2 -5.5
stress Bacitracin 0.25 mg/ml +0.0 -0.7 +0.2 -0.1 -5.1
stress Bacitracin 0.25 mg/ml -0.0 -0.2 -0.3 -0.1 -4.8
carbon source D-Alanine (C) -0.1 +0.3 +0.1 -0.3 -5.5
temperature Glucose defined 30C timecourse1 timepoint 3 -0.1 -0.2 +0.2 +0.2 -5.2
vitamin With vitamins t2 -0.3 -0.5 -0.0 +0.2 -3.9
vitamin No vitamins t2 -0.2 -0.0 -0.0 -0.2 -4.1
stress Def Vancomycin 0.016 mg/ml +0.2 +0.1 +0.1 -0.1 -4.7
stress Def Cephalothin 0.08 mg/ml -0.2 +0.2 -0.1 -0.3 -3.9
stress Anaerobic 500 uM Zinc chloride sample3 -0.1 -0.3 -0.1 -0.1 -3.7
carbon source L-tyrosine (C) -0.0 +0.0 +0.3 -0.4 -4.0
stress Anaerobic 500 uM Zinc chloride sample1 -0.1 -0.1 -0.2 -0.1 -3.5
stress Def Benzalkonium Chloride 0.002 mg/ml +0.1 +0.1 -0.2 +0.1 -4.1
stress Anaerobic 500 uM Zinc chloride sample2 -0.1 -0.0 +0.0 -0.2 -3.8
carbon source L-tyrosine (C) +0.1 -0.1 +0.1 +0.3 -4.4
stress Def 2-Furfuraldehyde 0.032 vol% +0.1 -0.0 -0.2 -0.2 -3.2
nitrogen source L-Isoleucine (N) +0.3 -0.5 -0.4 -1.3 -1.6
stress Polymyxin B sulfate 0.0001 mg/ml -0.4 +0.2 -0.3 -0.5 -2.4
carbon source Ethanol (C) +0.1 -0.0 +0.2 -0.3 -3.4
stress Def Cephalothin 0.04 mg/ml -0.2 +0.3 -0.1 +0.0 -3.3
stress Def Carbenicillin 0.008 mg/ml +1.0 +0.5 +0.3 -0.2 -4.9
carbon source Ethanol (C) +0.2 -0.1 +0.3 -0.1 -3.4
carbon source L-Leucine (C) +0.1 +0.3 +0.0 +0.2 -3.1
stress Def Polymyxin B sulfate 0.00008 mg/ml +0.4 +0.3 +0.1 -0.4 -2.7
stress Vancomycin 0.016 mg/ml -0.3 +0.6 +0.1 -0.0 -2.8
stress Cephalothin 0.04 mg/ml +0.8 +0.6 +0.5 -0.1 -3.8
stress Def Carbenicillin 0.02 mg/ml +0.2 +0.2 +0.4 +0.2 -2.7
stress Choline chloride 90 mM +0.0 -1.3 -0.2 +0.2 +1.9
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