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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_3302 and Psest_3303 are separated by 13 nucleotides
Psest_3303 and Psest_3304 overlap by 8 nucleotides
Psest_3304 and Psest_3305 are separated by 11 nucleotides
Psest_3305 and Psest_3306 overlap by 1 nucleotides
Psest_3302: Psest_3302 - Predicted membrane protein, at 3,469,392 to 3,469,883
_3302
Psest_3303: Psest_3303 - Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor), at 3,469,897 to 3,470,211
_3303
Psest_3304: Psest_3304 - ABC-type transport system involved in resistance to organic solvents, auxiliary component, at 3,470,204 to 3,470,851
_3304
Psest_3305: Psest_3305 - ABC-type transport system involved in resistance to organic solvents, periplasmic component, at 3,470,863 to 3,471,321
_3305
Psest_3306: Psest_3306 - conserved hypothetical integral membrane protein, at 3,471,321 to 3,472,118
_3306
Group
Condition
Psest
_3302
Psest
_3303
Psest
_3304
Psest
_3305
Psest
_3306
stress
Def Benzethonium chloride 0.008 mM
-0.6
-6.0
-5.6
-5.7
-5.7
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.4
-4.8
-4.3
-4.7
-4.7
stress
Def methylglyoxal 0.01 vol%
-0.5
-4.8
-4.7
-4.1
-4.0
stress
Vanillin 2 mM
-0.0
-4.5
-4.5
-4.3
-4.5
stress
Benzalkonium Chloride 0.002 mg/ml
-0.3
-4.0
-4.2
-4.5
-4.6
stress
Def Polymyxin B sulfate 0.00008 mg/ml
-0.5
-4.8
-4.1
-3.8
-3.8
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.7
-4.2
-3.1
-4.3
-4.6
stress
Def Polymyxin B sulfate 0.0001 mg/ml
-0.6
-3.8
-3.0
-4.2
-5.1
stress
Nalidixic 0.001 mg/ml
-0.1
-4.5
-3.1
-4.5
-3.7
stress
Def Doxycycline hyclate 0.0002 mg/ml
-0.0
-3.8
-3.6
-4.0
-4.5
carbon source
L-Glutamine (C)
-0.0
-4.3
-3.4
-3.2
-4.2
stress
methylglyoxal 0.0016 vol%
-0.0
-3.3
-3.8
-3.7
-4.2
carbon source
L-Glutamine (C)
-0.0
-3.5
-3.3
-3.7
-4.4
stress
Def Nalidixic 0.001 mg/ml
-0.4
-3.7
-3.5
-3.9
-3.3
stress
Doxycycline hyclate 0.0002 mg/ml
+0.0
-3.6
-3.9
-3.9
-3.0
stress
Choline chloride 90 mM
+0.1
-4.3
-2.3
-4.4
-3.5
stress
Fusidic 0.016 mg/ml
-0.5
-3.2
-3.6
-3.4
-3.2
stress
Choline chloride 90 mM
-0.4
-2.3
-3.7
-3.5
-3.5
carbon source
L-Glutamine (C)
-0.1
-3.6
-2.9
-3.9
-2.9
stress
Furfuryl Alcohol 0.05 vol%
-0.4
-2.3
-3.1
-3.5
-3.9
stress
Bacitracin 0.25 mg/ml
+0.2
-3.2
-2.7
-3.6
-3.7
stress
Bacitracin 0.25 mg/ml
-0.1
-3.1
-2.7
-3.0
-3.8
stress
nitrate 250 mM
-1.1
-3.1
-2.7
-3.2
-2.6
stress
Def Nalidixic 0.0005 mg/ml
-0.1
-3.1
-2.2
-3.5
-3.2
stress
Chlorite 0.06 mM
+0.2
-3.3
-2.8
-2.9
-3.3
carbon source
D-Maltose (C)
-0.0
-2.3
-2.7
-3.5
-3.6
stress
Gentamicin 0.0016 mg/ml
-0.5
-2.5
-3.0
-3.0
-2.6
stress
Def Neomycin 0.0008 mg/ml
-0.3
+3.8
+4.3
+3.9
+4.3
carbon source
L-tyrosine (C)
+0.4
+4.6
+3.9
+4.0
+4.3
carbon source
L-tyrosine (C)
+0.2
+4.7
+3.8
+4.1
+4.7
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