Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3293 and Psest_3294 are separated by 11 nucleotidesPsest_3294 and Psest_3295 are separated by 185 nucleotidesPsest_3295 and Psest_3296 are separated by 160 nucleotidesPsest_3296 and Psest_3297 are separated by 94 nucleotides Psest_3293: Psest_3293 - sulfate adenylyltransferase, large subunit, at 3,459,051 to 3,460,949 _3293 Psest_3294: Psest_3294 - sulfate adenylyltransferase, small subunit, at 3,460,961 to 3,461,878 _3294 Psest_3295: Psest_3295 - dinuclear metal center protein, YbgI/SA1388 family, at 3,462,064 to 3,462,822 _3295 Psest_3296: Psest_3296 - Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain, at 3,462,983 to 3,464,140 _3296 Psest_3297: Psest_3297 - histidinol-phosphate aminotransferase (EC 2.6.1.9) (from data), at 3,464,235 to 3,465,281 _3297
Group Condition Psest_3293 Psest_3294 Psest_3295 Psest_3296 Psest_3297
stress Def Phosphomycin 0.125 mg/ml N.D. N.D. -0.0 -3.1 -3.0
stress Def Neomycin 0.0008 mg/ml N.D. N.D. +0.2 -2.6 -2.9
temperature Glucose defined 30C timecourse1 timepoint 3 N.D. N.D. +0.2 -0.2 -5.1
stress Def A22 0.015 mg/ml N.D. N.D. +0.0 -2.0 -2.8
nitrogen source L-Asparagine (N) N.D. N.D. -0.2 -0.4 -4.0
stress Def Cephalothin 0.04 mg/ml N.D. N.D. -0.2 -1.1 -3.3
carbon source acetate (C) N.D. N.D. +0.2 -0.2 -4.5
temperature Glucose defined 30C timecourse1 timepoint 2 N.D. N.D. +0.7 -0.6 -4.2
carbon source L-Lactate (C) N.D. N.D. +0.6 +0.4 -4.5
stress Def Cisplatin 0.0002 mg/ml N.D. N.D. +0.3 +1.0 -3.9
nitrogen source L-Alanine (N) N.D. N.D. -0.3 +1.7 -3.9
stress Def Benzethonium chloride 0.008 mM N.D. N.D. +0.4 +1.7 -4.3
stress Def Polymyxin B sulfate 0.0001 mg/ml N.D. N.D. +0.2 +2.0 -4.3
carbon source RCH2 defined media N.D. N.D. +0.1 +1.5 -3.5
nitrogen source nitrate (N) N.D. N.D. +0.1 +2.4 -4.2
nitrogen source D-Alanine (N) N.D. N.D. +0.0 +2.2 -3.3
nitrogen source Adenine (N) N.D. N.D. -0.2 +2.6 -2.9
carbon source RCH2 defined media N.D. N.D. +0.6 +2.0 -2.9
stress Def Polymyxin B sulfate 0.00008 mg/ml N.D. N.D. +0.7 +2.7 -3.4
stress Def Chloride 400 mM N.D. N.D. +0.4 +1.9 -2.4
nitrogen source nitrite (N) N.D. N.D. -0.2 +3.3 -2.9
nitrogen source L-Valine (N) N.D. N.D. -0.7 +2.5 -1.5
nitrogen source Parabanic Acid (N) N.D. N.D. -0.6 +3.0 -1.9
stress Def 2-Furfuraldehyde 0.032 vol% N.D. N.D. +0.9 +3.6 -3.7
nitrogen source nitrite (N) N.D. N.D. +0.0 +4.1 -2.9
carbon source butyrate (C) N.D. N.D. -0.2 +3.2 -1.4
stress Def Benzalkonium Chloride 0.002 mg/ml N.D. N.D. +0.4 +2.9 -1.7
nitrogen source L-Isoleucine (N) N.D. N.D. -0.4 +3.5 -0.7
nitrogen source L-Isoleucine (N) N.D. N.D. -0.9 +4.5 -0.8
stress Cephalothin 0.04 mg/ml N.D. N.D. +0.8 +4.0 -0.8
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