Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3285 and Psest_3286 are separated by 142 nucleotidesPsest_3286 and Psest_3287 are separated by 2 nucleotidesPsest_3287 and Psest_3288 are separated by 1 nucleotidesPsest_3288 and Psest_3289 are separated by 320 nucleotides Psest_3285: Psest_3285 - dephospho-CoA kinase, at 3,450,972 to 3,451,580 _3285 Psest_3286: Psest_3286 - Type II secretory pathway, prepilin signal peptidase PulO and related peptidases, at 3,451,723 to 3,452,592 _3286 Psest_3287: Psest_3287 - Type II secretory pathway, component PulF, at 3,452,595 to 3,453,812 _3287 Psest_3288: Psest_3288 - type IV-A pilus assembly ATPase PilB, at 3,453,814 to 3,455,517 _3288 Psest_3289: Psest_3289 - prepilin-type N-terminal cleavage/methylation domain, at 3,455,838 to 3,456,266 _3289
Group Condition Psest_3285 Psest_3286 Psest_3287 Psest_3288 Psest_3289
carbon source butyrate (C) N.D. -3.3 -2.8 -3.9 -2.5
carbon source butyrate (C) N.D. -3.1 -2.1 -3.8 -2.3
carbon source L-Leucine (C) N.D. -1.2 -2.0 -2.8 -1.6
carbon source L-Leucine (C) N.D. -1.2 -1.8 -2.4 -1.7
carbon source D-Maltose (C) N.D. -1.5 -1.9 -1.9 -1.5
carbon source D-Maltose (C) N.D. -1.1 -2.1 -2.1 -1.4
carbon source Glycerol (C) N.D. -1.7 -1.6 -1.6 -1.8
nitrogen source L-Glutamine (N) N.D. -1.6 -1.6 -2.0 -1.2
carbon source D,L-Lactate (C) N.D. -1.5 -1.3 -2.0 -1.1
nitrogen source L-Alanine (N) N.D. -1.2 -1.5 -1.7 -1.4
carbon source D-Maltose (C) N.D. -1.0 -1.9 -1.6 -1.2
nitrogen source L-Glutamine (N) N.D. -1.5 -1.4 -1.5 -1.3
carbon source D,L-Lactate (C) N.D. -1.7 -0.8 -1.6 -1.3
carbon source Glycerol (C) N.D. -1.4 -1.3 -1.6 -1.0
nitrogen source Urea (N) N.D. -1.3 -1.1 -1.6 -1.4
nitrogen source Adenine (N) N.D. -1.3 -1.1 -1.7 -1.1
stress Def Benzalkonium Chloride 0.002 mg/ml N.D. -1.9 -1.0 -1.1 -0.9
nitrogen source Adenine (N) N.D. -0.9 -1.3 -1.5 -1.3
nitrogen source D-Alanine (N) N.D. -1.4 -1.2 -1.4 -0.8
nitrogen source L-Proline (N) N.D. -1.3 -1.3 -1.4 -0.9
nitrogen source Ammonium chloride (N) N.D. -1.2 -1.1 -1.5 -1.0
nitrogen source L-Asparagine (N) N.D. -1.4 -1.3 -1.3 -0.8
carbon source L-Proline (C) N.D. -1.0 -1.0 -1.0 -1.6
nitrogen source Cytosine (N) N.D. -0.7 -1.2 -1.5 -1.0
carbon source butyrate (C) N.D. -0.6 -0.7 -2.7 +0.5
carbon source L-Glutamine (C) N.D. +2.6 -0.1 -0.4 +1.6
carbon source L-Glutamine (C) N.D. +2.6 -0.0 -0.4 +1.6
carbon source L-Glutamine (C) N.D. +2.5 +0.0 -0.2 +1.7
stress Bacitracin 0.25 mg/ml N.D. +1.3 +1.3 +1.3 +0.5
stress Carbenicillin 0.008 mg/ml N.D. +1.5 +1.1 +1.0 +1.1
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