Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3236 and Psest_3237 are separated by 169 nucleotidesPsest_3237 and Psest_3238 are separated by 89 nucleotidesPsest_3238 and Psest_3239 are separated by 353 nucleotidesPsest_3239 and Psest_3240 are separated by 190 nucleotides Psest_3236: Psest_3236 - hypothetical protein, at 3,407,100 to 3,407,684 _3236 Psest_3237: Psest_3237 - hypothetical protein, at 3,407,854 to 3,408,045 _3237 Psest_3238: Psest_3238 - malate:quinone-oxidoreductase, at 3,408,135 to 3,409,625 _3238 Psest_3239: Psest_3239 - hypothetical protein, at 3,409,979 to 3,410,266 _3239 Psest_3240: Psest_3240 - Sulfate permease and related transporters (MFS superfamily), at 3,410,457 to 3,412,187 _3240
Group Condition Psest_3236 Psest_3237 Psest_3238 Psest_3239 Psest_3240
RCH2 grown on a colony of 8R2A -1.5 -1.5 N.D. -0.8 -1.1
carbon source propionate (C) -0.1 -2.5 N.D. -0.9 -0.3
anaerobic Nitrite/ lactate media with Nitrite 20mM -1.4 -1.2 N.D. -0.5 +0.0
stress Phosphomycin 0.012 mg/ml -1.1 -1.4 N.D. +0.2 -0.5
stress Choline Lysine 20 mM -2.7 +0.4 N.D. -0.3 +0.3
stress Furfuryl Alcohol 0.05 vol% +0.3 -2.5 N.D. +0.4 -0.3
stress nitrite 2.5 mM -0.4 -1.3 N.D. -0.7 +0.4
stress Nalidixic 0.00390625 mg/ml +0.6 -2.1 N.D. +0.2 -0.7
carbon source L-tyrosine (C) -2.1 -0.4 N.D. +0.8 -0.3
anaerobic Nitrite/ lactate media with Nitrite 20mM -2.2 +0.4 N.D. +0.1 -0.1
stress Choline Lysine 20 mM -2.5 +0.0 N.D. +0.4 +0.3
stress Cobalt chloride 0.08 mM -1.9 -0.2 N.D. -0.1 +0.5
nitrogen source L-Citrulline (N) -1.0 -1.2 N.D. +0.5 -0.0
stress L-Lysine 200 mM -2.0 +0.5 N.D. +0.2 -0.2
stress Bacitracin 0.25 mg/ml -1.9 +0.6 N.D. -0.1 +0.0
RCH2 grown on a colony of Serratia -1.7 +1.3 N.D. -0.5 -0.6
stress syringaldehyde 3 mM -1.9 +0.6 N.D. -0.4 +0.2
nitrogen source L-Glutamic (N) -0.6 +0.5 N.D. -1.5 +0.3
stress nitrate 200 mM -0.4 +1.0 N.D. -1.2 -0.7
stress Nickel (II) chloride 0.9 mM -0.7 -1.3 N.D. +0.0 +0.8
stress Def Vancomycin 0.008 mg/ml -2.0 +0.5 N.D. +0.3 +0.1
stress Def Vancomycin 0.016 mg/ml -1.9 +0.7 N.D. +0.2 -0.0
stress sodium fluoride 8.5 mM -0.7 +1.0 N.D. -1.0 -0.1
stress Spectinomycin 0.00625 mg/ml +0.9 +0.3 N.D. -1.1 -0.7
stress Fusidic 0.016 mg/ml -1.6 +0.8 N.D. +0.4 +0.0
nutrient L-tyrosine +1.0 -0.9 N.D. -0.6 +0.3
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +1.4 -1.3 N.D. +0.3 -0.2
stress Def Carbenicillin 0.008 mg/ml -1.1 +1.0 N.D. +0.9 +0.3
RCH2 grown on a colony of N2C3 +1.1 +2.2 N.D. -0.8 -0.7
nitrogen source nitrite (N) +0.2 +1.6 N.D. +0.7 +0.9
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