Fitness for 5 genes in Pseudomonas stutzeri RCH2

Add gene:

Number of genes on each side:  

Top 30 experiments (either direction), sorted by average fitness

Or view all 424 experiments or choose conditions or try the comparative fitness browser

500 ntPsest_3218 and Psest_3219 are separated by 130 nucleotidesPsest_3219 and Psest_3221 are separated by 364 nucleotidesPsest_3221 and Psest_3222 are separated by 106 nucleotidesPsest_3222 and Psest_3223 are separated by 68 nucleotides Psest_3218: Psest_3218 - Outer membrane protein and related peptidoglycan-associated (lipo)proteins, at 3,391,556 to 3,392,209 _3218 Psest_3219: Psest_3219 - Zn-dependent hydrolases, including glyoxylases, at 3,392,340 to 3,392,990 _3219 Psest_3221: Psest_3221 - Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II, at 3,393,355 to 3,395,040 _3221 Psest_3222: Psest_3222 - Putative threonine efflux protein, at 3,395,147 to 3,395,776 _3222 Psest_3223: Psest_3223 - Lactate dehydrogenase and related dehydrogenases, at 3,395,845 to 3,396,804 _3223
Group Condition Psest_3218 Psest_3219 Psest_3221 Psest_3222 Psest_3223
RCH2 grown on a colony of N2F3 +0.0 -0.5 -0.1 -2.7 N.D.
stress Polymyxin B sulfate 0.0001 mg/ml -0.8 -0.4 -0.2 -1.3 N.D.
stress Paraquat dichloride 0.015 mg/ml -0.3 -0.5 +0.1 -1.5 N.D.
stress sodium fluoride 6.25 mM -0.1 -0.2 -0.3 -1.4 N.D.
stress nitrate 250 mM -0.8 -0.0 +0.2 -1.4 N.D.
stress Gentamicin 0.0016 mg/ml +0.2 -0.2 +0.1 -1.9 N.D.
stress Thallium(I) acetate 0.1 mg/ml -0.2 +0.4 -0.3 -1.8 N.D.
RCH2 grown on a colony of N2F3 -0.3 -0.4 +0.0 -1.0 N.D.
carbon source Glycolic Acid (C) +0.0 +0.3 -0.3 -1.7 N.D.
stress L-Lysine 200 mM -0.8 +0.5 +0.0 -1.4 N.D.
RCH2 grown on a colony of Serratia +0.2 -0.2 -0.1 -1.3 N.D.
stress Def Nalidixic 0.001 mg/ml -0.4 +0.3 +0.0 -1.3 N.D.
stress Choline Lysine 20 mM +0.1 -0.2 +0.1 -1.4 N.D.
stress Lactate-nitrate; anaerobic; copper stress sample2 -0.2 +0.2 +0.1 -1.4 N.D.
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.3 -0.4 +0.1 -1.1 N.D.
RCH2 grown on a colony of N2A2 -0.1 +0.3 +0.1 -1.4 N.D.
nutrient L-tyrosine -0.2 +0.5 +0.0 -1.3 N.D.
stress Bacitracin 0.25 mg/ml -1.3 -0.1 -0.1 +0.7 N.D.
stress Def Benzalkonium Chloride 0.002 mg/ml -0.5 +0.6 +0.2 -0.9 N.D.
stress Def Neomycin 0.0008 mg/ml -1.2 +0.2 +0.2 +0.7 N.D.
stress L-Lysine 200 mM -0.5 -0.3 -0.1 +0.8 N.D.
stress Bacitracin 0.25 mg/ml -0.9 +0.4 +0.0 +0.4 N.D.
RCH2 grown on a colony of ecoli -0.1 +0.8 +0.2 -1.0 N.D.
carbon source L-tyrosine (C) -0.5 +0.1 +0.0 +1.1 N.D.
stress syringaldehyde 3 mM -0.6 +0.1 -0.1 +1.4 N.D.
stress Cisplatin 0.003 mg/ml -0.4 +0.3 -0.1 +1.2 N.D.
stress Nalidixic 0.00390625 mg/ml -0.3 +0.7 +0.0 +0.9 N.D.
stress Paraquat dichloride 0.015 mg/ml -0.2 +0.5 -0.1 +1.3 N.D.
stress 1-ethyl-3-methylimidazolium acetate 20 mM -0.1 +0.1 +0.1 +1.8 N.D.
stress acetate 80 mM -0.0 +0.7 +0.1 +1.1 N.D.
remove
Psest_3218
plot
remove
Psest_3219
plot
remove
Psest_3221
remove
Psest_3222
plot
remove
Psest_3223
plot