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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_3200 and Psest_3201 are separated by 15 nucleotides
Psest_3201 and Psest_3202 are separated by 106 nucleotides
Psest_3202 and Psest_3203 are separated by 229 nucleotides
Psest_3203 and Psest_3204 are separated by 66 nucleotides
Psest_3200: Psest_3200 - Uncharacterized protein conserved in bacteria, at 3,371,909 to 3,372,481
_3200
Psest_3201: Psest_3201 - Ribulose-5-phosphate 4-epimerase and related epimerases and aldolases, at 3,372,497 to 3,373,273
_3201
Psest_3202: Psest_3202 - Flavodoxins, at 3,373,380 to 3,373,832
_3202
Psest_3203: Psest_3203 - hypothetical protein, at 3,374,062 to 3,374,688
_3203
Psest_3204: Psest_3204 - Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases), at 3,374,755 to 3,375,459
_3204
Group
Condition
Psest
_3200
Psest
_3201
Psest
_3202
Psest
_3203
Psest
_3204
carbon source
propionate (C)
-1.6
+0.1
-2.0
-0.8
-0.6
RCH2 grown on a colony of N2F3
-0.5
+0.3
-0.8
-1.5
-1.7
stress
Def Chlorate 40 mM
-0.1
+0.0
-2.0
-0.7
-1.2
RCH2 grown on a colony of Serratia
-1.2
-1.0
-1.2
-0.6
+0.2
RCH2 grown on a colony of N2C3
-0.5
-0.5
-0.2
-0.2
-2.1
carbon source
propionate (C)
-1.7
+1.0
-1.7
+0.0
-0.2
stress
Choline Lysine 20 mM
+0.2
-0.3
-0.5
-0.4
-1.3
stress
Bacitracin 0.25 mg/ml
-0.5
-0.4
+0.6
-1.2
-0.7
stress
Carbenicillin 0.008 mg/ml
-1.3
-0.1
-0.4
-0.4
+0.1
stress
Bacitracin 0.25 mg/ml
-0.1
+0.3
-0.0
-1.6
-0.5
stress
Aluminum chloride 0.3 mM
-0.5
-0.6
-0.9
+0.1
+0.4
RCH2 grown on a colony of ecoli
+0.7
-0.6
-0.4
-1.4
+0.1
stress
Nalidixic 0.00390625 mg/ml
+0.4
-0.1
-0.2
-1.4
-0.2
stress
Nalidixic 0.00390625 mg/ml
+0.8
-1.1
+0.1
-1.0
+0.3
RCH2 grown on a colony of N2F3
-0.2
+0.2
-0.1
+0.6
-1.6
stress
nitrate 250 mM
-0.4
+0.3
+1.3
-1.1
-1.0
carbon source
butyrate (C)
+0.2
+0.1
+0.1
+1.1
-2.0
carbon source
L-tyrosine (C)
+0.3
+1.4
+0.1
-0.4
-1.7
stress
Cobalt chloride 0.08 mM
+0.1
-0.2
-1.5
+0.4
+1.0
stress
Benzethonium chloride 0.0125 mM
-0.3
-0.4
+1.1
-0.2
-0.4
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.6
+0.3
+0.8
+0.9
-0.4
stress
Paraquat dichloride 0.015 mg/ml
+0.1
-0.1
+2.0
-0.3
-0.5
stress
Chlorate 75 mM
-0.7
+0.1
+2.0
+0.2
-0.1
stress
Nickel (II) chloride 0.9 mM
-0.1
-0.2
-0.1
+0.2
+1.8
stress
D-Cycloserine 0.032 mg/ml
-0.5
+0.6
+2.5
-0.7
-0.0
stress
D-Cycloserine 0.032 mg/ml
-0.3
-0.1
+2.3
+0.2
+0.1
stress
methylglyoxal 0.0016 vol%
+0.7
+0.3
+1.6
+0.2
-0.3
stress
Paraquat dichloride 0.015 mg/ml
+0.1
-0.2
+2.5
+0.5
-0.4
stress
Nickel (II) chloride 0.8 mM
-0.1
+0.2
+2.5
-0.1
+0.5
stress
Furfuryl Alcohol 0.05 vol%
+0.4
+0.4
+5.1
-0.0
+0.2
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