Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3176 and Psest_3177 overlap by 1 nucleotidesPsest_3177 and Psest_3178 are separated by 15 nucleotidesPsest_3178 and Psest_3179 are separated by 351 nucleotidesPsest_3179 and Psest_3180 are separated by 144 nucleotides Psest_3176: Psest_3176 - Predicted ATPase, at 3,348,200 to 3,349,675 _3176 Psest_3177: Psest_3177 - hypothetical protein, at 3,349,675 to 3,349,887 _3177 Psest_3178: Psest_3178 - formyltetrahydrofolate deformylase, at 3,349,903 to 3,350,754 _3178 Psest_3179: Psest_3179 - hypothetical protein, at 3,351,106 to 3,351,486 _3179 Psest_3180: Psest_3180 - Exonuclease I, at 3,351,631 to 3,353,091 _3180
Group Condition Psest_3176 Psest_3177 Psest_3178 Psest_3179 Psest_3180
RCH2 grown on a colony of N2A2 -0.3 -2.3 -4.8 N.D. -0.7
RCH2 grown on a colony of ecoli -0.5 -2.2 -5.1 N.D. -0.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -0.1 -2.7 -4.1 N.D. -0.8
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.1 -2.0 -4.0 N.D. -0.7
nitrogen source Adenine (N) -0.3 -0.3 -5.3 N.D. -0.4
temperature Glucose defined 30C timecourse1 timepoint 3 -0.6 -0.0 -4.7 N.D. -0.8
RCH2 grown on a colony of N2A2 -0.5 -1.5 -4.0 N.D. -0.1
nitrogen source nitrate (N) -0.3 -0.5 -4.2 N.D. -0.8
stress Def Cephalothin 0.04 mg/ml +0.6 -2.7 -2.8 N.D. -0.4
nitrogen source Adenine (N) +0.0 +0.1 -4.7 N.D. -0.3
stress Carbenicillin 0.0065 mg/ml -0.2 -2.4 -0.9 N.D. -1.4
RCH2 grown on a colony of ecoli +0.3 +0.5 -4.9 N.D. -0.7
temperature Glucose defined 30C timecourse1 timepoint 2 -0.4 -0.2 -3.4 N.D. -0.7
temperature LB 30C timecourse1 timepoint 3 -0.8 -1.1 -1.1 N.D. -1.7
nitrogen source Adenine (N) +0.1 -0.6 -3.7 N.D. -0.4
stress Choline Lysine 20 mM -0.2 -3.2 -0.0 N.D. -1.0
nitrogen source nitrite (N) -0.2 -1.1 -2.4 N.D. -0.7
stress L-Lysine 200 mM -0.0 -2.3 -1.1 N.D. -0.9
nitrogen source Parabanic Acid (N) -0.4 -0.6 -2.4 N.D. -0.8
stress Gentamicin 0.0016 mg/ml -0.7 -0.3 -2.1 N.D. -1.0
carbon source L-Lactate (C) -0.4 -1.8 -1.3 N.D. -0.4
stress Choline chloride 90 mM -0.3 -2.4 +0.2 N.D. -1.3
nitrogen source L-Glutamic (N) +0.2 -0.7 -2.4 N.D. -0.9
nitrogen source nitrite (N) -0.1 -0.7 -2.4 N.D. -0.6
temperature LB 30C timecourse1 timepoint 1 -0.5 -1.4 -1.1 N.D. -0.8
carbon source L-tyrosine (C) +0.3 +0.4 -3.3 N.D. -1.2
stress Def 2-Furfuraldehyde 0.032 vol% +0.5 -0.3 -2.5 N.D. -1.0
RCH2 grown on a colony of Serratia +0.7 -0.2 -3.0 N.D. +0.5
radiation Ionizing radiation, 319.06 Gy, -1.0 +1.0 -1.7 N.D. +0.6
stress Neomycin 0.004 mg/ml -0.4 +1.4 +1.3 N.D. -0.7
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