Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3151 and Psest_3153 are separated by 278 nucleotidesPsest_3153 and Psest_3154 overlap by 10 nucleotidesPsest_3154 and Psest_3155 are separated by 639 nucleotidesPsest_3155 and Psest_3156 are separated by 149 nucleotides Psest_3151: Psest_3151 - hypothetical protein, at 3,321,918 to 3,322,388 _3151 Psest_3153: Psest_3153 - hypothetical protein, at 3,322,667 to 3,322,885 _3153 Psest_3154: Psest_3154 - hypothetical protein, at 3,322,876 to 3,324,540 _3154 Psest_3155: Psest_3155 - hypothetical protein, at 3,325,180 to 3,325,464 _3155 Psest_3156: Psest_3156 - Site-specific recombinases, DNA invertase Pin homologs, at 3,325,614 to 3,326,156 _3156
Group Condition Psest_3151 Psest_3153 Psest_3154 Psest_3155 Psest_3156
carbon source L-tyrosine (C) -1.5 N.D. -0.1 -0.6 -0.9
RCH2 grown on a colony of 8R2A -0.4 N.D. -0.3 -1.8 -0.6
temperature LB 30C timecourse1 timepoint 3 -1.0 N.D. -0.4 -0.6 -0.5
RCH2 grown on a colony of N2C3 -1.1 N.D. -0.5 -0.3 -0.6
radiation Ionizing radiation, 319.06 Gy, -2.0 N.D. -0.2 +0.1 -0.3
stress Cholin acetate 40 mM -1.7 N.D. +0.0 -0.2 -0.5
stress Benzethonium chloride 0.01 mM -1.3 N.D. -0.2 -0.9 +0.1
stress nitrate 250 mM -0.8 N.D. -0.7 -0.6 -0.2
stress Lactate-nitrate; anaerobic; dichromate stress sample2 -1.6 N.D. -0.4 -0.3 +0.2
stress Chlorate 75 mM -0.8 N.D. -0.8 -0.6 +0.3
stress Benzethonium chloride 0.01 mM -2.0 N.D. +0.1 +0.5 -0.4
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -1.5 N.D. +0.1 -0.7 +0.5
stress Carbenicillin 0.0065 mg/ml -1.0 N.D. +0.3 +0.1 -1.0
stress Fusidic 0.016 mg/ml +0.3 N.D. -0.5 -1.8 +0.7
stress Def Carbenicillin 0.008 mg/ml +0.2 N.D. -0.9 -0.8 +0.5
stress Furfuryl Alcohol 0.05 vol% -1.9 N.D. +0.5 +0.5 -0.0
RCH2 grown on a colony of N2A2 -1.3 N.D. -0.2 +0.7 -0.0
stress nitrate 200 mM -1.5 N.D. +0.3 +0.2 +0.3
stress Polymyxin B sulfate 0.0001 mg/ml -1.4 N.D. +0.3 +0.7 -0.4
stress Thallium(I) acetate 0.09 mg/ml +0.6 N.D. +0.2 -0.3 -1.1
nitrogen source nitrite (N) -1.3 N.D. -0.0 +0.2 +0.5
RCH2 grown on a colony of N2F3 -0.7 N.D. +0.2 +1.2 -0.8
stress perchlorate 25 mM -0.8 N.D. +0.0 +1.1 -0.5
RCH2 grown on a colony of Serratia -0.8 N.D. +0.1 +1.0 -0.3
carbon source RCH2 defined media +0.5 N.D. -0.5 -0.6 +0.6
nitrogen source L-Glutamic (N) +0.9 N.D. -0.5 -1.0 +0.6
stress 2-Furfuraldehyde 0.05 vol% +0.9 N.D. +0.2 -1.2 +0.3
stress Choline chloride 90 mM +1.0 N.D. +0.3 -0.1 -0.8
stress Zinc 0.12 mM -0.7 N.D. +0.1 +1.2 -0.1
stress Spectinomycin 0.00625 mg/ml +0.9 N.D. -0.2 +0.8 +0.5
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