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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_3071 and Psest_3072 overlap by 1 nucleotides
Psest_3072 and Psest_3073 are separated by 240 nucleotides
Psest_3073 and Psest_3074 are separated by 206 nucleotides
Psest_3074 and Psest_3075 are separated by 102 nucleotides
Psest_3071: Psest_3071 - Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit, at 3,247,378 to 3,248,175
_3071
Psest_3072: Psest_3072 - Acyl CoA:acetate/3-ketoacid CoA transferase, alpha subunit, at 3,248,175 to 3,249,032
_3072
Psest_3073: Psest_3073 - beta-ketoadipate pathway transcriptional regulators, PcaR/PcaU/PobR family, at 3,249,273 to 3,250,115
_3073
Psest_3074: Psest_3074 - Domain of Unknown Function (DUF1206)., at 3,250,322 to 3,251,137
_3074
Psest_3075: Psest_3075 - sodium/proline symporter, at 3,251,240 to 3,252,724
_3075
Group
Condition
Psest
_3071
Psest
_3072
Psest
_3073
Psest
_3074
Psest
_3075
stress
benzoic 0.4 mg/ml
-1.3
-1.7
-0.3
-0.2
-0.0
stress
Benzalkonium Chloride 0.002 mg/ml
-1.3
-1.0
-0.6
+0.0
-0.3
RCH2 grown on a colony of ecoli
-2.5
-0.8
+0.3
-0.0
+0.1
stress
benzoic 0.4 mg/ml
-1.0
-1.2
-0.4
-0.1
+0.2
RCH2 grown on a colony of ecoli
-1.7
-0.8
-0.1
+0.2
+0.1
RCH2 grown on a colony of N2A2
-0.5
-1.3
-0.1
-0.2
+0.1
stress
Chlorate 75 mM
-0.7
-0.9
+0.2
-0.6
+0.2
stress
Def Chlorate 40 mM
-0.7
-0.5
-0.4
-0.2
+0.1
stress
D-Cycloserine 0.032 mg/ml
-0.1
-1.1
-0.1
-0.3
-0.2
stress
benzoic 0.4 mg/ml
-0.4
-0.6
-0.2
-0.2
-0.2
stress
Phosphomycin 0.012 mg/ml
+0.1
-0.4
-0.1
-0.3
-0.7
stress
Thallium(I) acetate 0.08 mg/ml
-0.3
-0.9
-0.0
+0.3
-0.4
stress
Bacitracin 0.25 mg/ml
-0.1
-0.8
-0.3
+0.3
-0.2
RCH2 grown on a colony of N2F3
-0.2
+0.5
-0.1
-0.8
-0.3
nitrogen source
L-Proline (N)
-0.3
+0.2
+0.0
+0.2
-1.2
stress
Def Chloride 400 mM
-0.6
-0.4
-0.3
-0.0
+0.7
stress
Def 2-Furfuraldehyde 0.032 vol%
-1.0
-0.7
+0.3
+0.5
+0.4
carbon source
L-tyrosine (C)
-0.4
-1.1
+0.3
-0.3
+1.2
RCH2 grown on a colony of Serratia
-0.0
-0.7
+0.1
-0.1
+0.7
stress
Chloride 200 mM
-0.3
+0.6
+0.2
-0.1
-0.4
stress
Lactate-nitrate; anaerobic; copper stress sample3
+0.4
+0.4
-0.3
-0.3
-0.1
RCH2 grown on a colony of 8R2A
-0.4
-0.3
+0.5
+0.4
+0.1
RCH2 grown on a colony of N2F3
+0.0
+1.0
-0.2
+0.4
-0.3
stress
Furfuryl Alcohol 0.3 vol%
+0.6
-0.3
+0.4
-0.2
+0.5
RCH2 grown on a colony of N2C3
+0.5
-0.1
+0.6
-0.4
+0.5
carbon source
L-tyrosine (C)
-0.1
+0.1
+0.1
-0.6
+1.6
RCH2 grown on a colony of Serratia
+0.0
+0.9
+0.2
+0.6
-0.1
stress
Choline chloride 90 mM
-0.0
+0.7
-0.1
+0.4
+0.8
lb
LB
+0.1
+0.8
+0.3
+0.2
+0.4
nitrogen source
nitrite (N)
+0.5
+0.6
+0.6
+0.6
+0.5
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