Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3039 and Psest_3040 are separated by 49 nucleotidesPsest_3040 and Psest_3041 overlap by 1 nucleotidesPsest_3041 and Psest_3042 are separated by 13 nucleotidesPsest_3042 and Psest_3043 are separated by 10 nucleotides Psest_3039: Psest_3039 - periplasmic nitrate reductase, NapE protein, at 3,222,624 to 3,222,803 _3039 Psest_3040: Psest_3040 - Uncharacterized protein involved in formation of periplasmic nitrate reductase, at 3,222,853 to 3,223,107 _3040 Psest_3041: Psest_3041 - periplasmic nitrate reductase, large subunit, at 3,223,107 to 3,225,611 _3041 Psest_3042: Psest_3042 - Nitrate reductase cytochrome c-type subunit, at 3,225,625 to 3,226,113 _3042 Psest_3043: Psest_3043 - periplasmic nitrate (or nitrite) reductase c-type cytochrome, NapC/NirT family, at 3,226,124 to 3,226,720 _3043
Group Condition Psest_3039 Psest_3040 Psest_3041 Psest_3042 Psest_3043
stress Def Carbenicillin 0.02 mg/ml -4.0 -0.1 -0.1 -1.9 +0.3
RCH2 grown on a colony of 8R2A -3.0 -0.7 -0.3 -1.6 +0.1
stress Nalidixic 0.00390625 mg/ml -1.4 -0.8 +0.2 -3.0 +0.3
RCH2 grown on a colony of Serratia -0.3 -1.0 -0.3 -2.0 -0.3
stress A22 0.002 mg/ml -1.1 -0.7 +0.1 -1.9 -0.3
stress Spectinomycin 0.00625 mg/ml -0.6 -0.2 -0.4 -2.6 +0.0
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -1.2 -0.6 +0.1 -1.6 -0.2
RCH2 grown on a colony of N2F3 -4.1 +0.1 +0.1 +1.0 -0.5
stress Spectinomycin 0.00625 mg/ml -2.0 +0.2 +0.1 -1.3 -0.4
stress Vanillin 2 mM -1.9 -0.5 -0.1 -1.0 +0.1
stress Nickel (II) chloride 1 mM -2.6 +0.3 -0.0 -0.5 -0.6
nitrogen source L-Isoleucine (N) -1.8 +0.1 +0.0 -1.6 -0.1
carbon source L-Glutamine (C) -1.1 -0.1 -0.0 -1.9 -0.1
nitrogen source L-Valine (N) -1.8 -0.5 +0.2 -0.8 +0.0
stress Cobalt chloride 0.06 mM -1.0 +0.1 -0.2 -1.9 +0.0
stress Benzethonium chloride 0.0125 mM -1.2 +0.2 +0.2 -1.3 -0.3
stress Cobalt chloride 0.08 mM -0.8 +0.2 -0.0 -2.0 +0.3
stress Bacitracin 0.25 mg/ml -0.7 +0.4 -0.1 -2.3 +0.4
stress Neomycin 0.004 mg/ml -3.0 +0.1 -0.0 +0.4 +0.2
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.5 +0.1 +0.0 -2.7 +0.2
RCH2 grown on a colony of N2A2 +0.9 -0.5 -0.1 -1.9 +0.3
stress Choline chloride 90 mM +1.4 -0.5 +0.1 -1.3 -0.3
stress Def 2-Furfuraldehyde 0.032 vol% -1.4 -0.6 +0.0 +0.7 +0.9
vitamin With vitamins t2 -1.7 +0.1 +0.1 +1.1 -0.1
stress Lactate-nitrate; anaerobic; dichromate stress sample2 +1.6 -0.4 +0.2 -0.6 +0.3
stress A22 0.005 mg/ml -1.1 +0.2 +0.2 +1.8 +0.4
stress Fusidic 0.016 mg/ml +0.8 -0.6 +0.2 +1.4 +0.4
stress acetate 80 mM +1.4 +0.3 +0.0 +1.0 +0.3
stress Lactate-nitrate; anaerobic; dichromate stress sample1 +1.1 -0.2 +0.2 +1.9 +0.4
RCH2 grown on a colony of N2C3 +1.7 -0.1 -0.1 +3.6 +0.5
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