Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_3037 and Psest_3038 are separated by 16 nucleotidesPsest_3038 and Psest_3039 are separated by 198 nucleotidesPsest_3039 and Psest_3040 are separated by 49 nucleotidesPsest_3040 and Psest_3041 overlap by 1 nucleotides Psest_3037: Psest_3037 - Uncharacterized protein conserved in bacteria, at 3,220,736 to 3,221,230 _3037 Psest_3038: Psest_3038 - Arabinose efflux permease, at 3,221,247 to 3,222,425 _3038 Psest_3039: Psest_3039 - periplasmic nitrate reductase, NapE protein, at 3,222,624 to 3,222,803 _3039 Psest_3040: Psest_3040 - Uncharacterized protein involved in formation of periplasmic nitrate reductase, at 3,222,853 to 3,223,107 _3040 Psest_3041: Psest_3041 - periplasmic nitrate reductase, large subunit, at 3,223,107 to 3,225,611 _3041
Group Condition Psest_3037 Psest_3038 Psest_3039 Psest_3040 Psest_3041
stress Def Carbenicillin 0.02 mg/ml -0.5 -0.0 -4.0 -0.1 -0.1
RCH2 grown on a colony of 8R2A -0.0 +0.2 -3.0 -0.7 -0.3
RCH2 grown on a colony of N2F3 +0.5 -0.0 -4.1 +0.1 +0.1
stress Neomycin 0.004 mg/ml -0.6 +0.1 -3.0 +0.1 -0.0
stress Nickel (II) chloride 1 mM -0.1 -0.0 -2.6 +0.3 -0.0
stress Nalidixic 0.00390625 mg/ml +0.0 -0.4 -1.4 -0.8 +0.2
stress Vanillin 2 mM -0.2 +0.2 -1.9 -0.5 -0.1
radiation Ionizing radiation, 0 Gy +0.0 -0.2 -1.8 -0.1 -0.1
stress Def Lomefloxacin 0.00004 mM -0.2 -0.1 -1.5 -0.3 +0.0
nitrogen source L-Valine (N) +0.1 +0.1 -1.8 -0.5 +0.2
carbon source D-Gluconic Acid (C) -0.1 +0.1 -1.9 +0.0 -0.1
stress Choline Lysine 20 mM +0.1 +0.1 -1.5 -0.5 -0.0
nitrogen source L-Isoleucine (N) +0.2 -0.2 -1.8 +0.1 +0.0
stress Spectinomycin 0.00625 mg/ml +0.3 -0.1 -2.0 +0.2 +0.1
stress Def 2-Furfuraldehyde 0.032 vol% +0.2 +0.2 -1.4 -0.6 +0.0
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 +0.1 +0.2 -1.2 -0.6 +0.1
vitamin With vitamins t2 -0.1 +0.2 -1.7 +0.1 +0.1
stress acetate 80 mM -0.1 -0.1 -1.7 +0.4 +0.2
stress A22 0.002 mg/ml +0.3 +0.1 -1.1 -0.7 +0.1
stress nitrate 200 mM -0.3 -0.0 -1.4 +0.3 +0.2
stress Phosphomycin 0.012 mg/ml +0.3 +0.2 -1.3 +0.2 +0.2
stress Nickel (II) chloride 0.9 mM +0.5 +0.1 -1.0 +0.4 +0.3
metal limitation Lactate-nitrite; anaerobic; sample1 -0.5 -0.1 +1.4 -0.2 +0.1
stress Cisplatin 0.003 mg/ml +0.2 -0.2 +1.4 -0.4 -0.0
stress Choline chloride 90 mM -0.0 +0.2 +1.4 -0.5 +0.1
stress Lactate-nitrate; anaerobic; dichromate stress sample2 -0.0 -0.0 +1.6 -0.4 +0.2
RCH2 grown on a colony of N2C3 -0.0 -0.2 +1.7 -0.1 -0.1
stress Thallium(I) acetate 0.1 mg/ml +0.6 -0.0 +1.4 -0.4 +0.0
stress Lactate-nitrate; anaerobic sample1 -0.1 -0.2 +2.0 -0.1 +0.0
stress nitrate 200 mM +0.3 +0.4 +1.2 +0.4 +0.4
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