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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_3018 and Psest_3019 are separated by 191 nucleotides
Psest_3019 and Psest_3020 are separated by 76 nucleotides
Psest_3020 and Psest_3021 are separated by 67 nucleotides
Psest_3021 and Psest_3022 are separated by 134 nucleotides
Psest_3018: Psest_3018 - Na+/H+ antiporter NhaD and related arsenite permeases, at 3,206,705 to 3,207,958
_3018
Psest_3019: Psest_3019 - Cell wall-associated hydrolases (invasion-associated proteins), at 3,208,150 to 3,208,674
_3019
Psest_3020: Psest_3020 - Cell wall-associated hydrolases (invasion-associated proteins), at 3,208,751 to 3,209,383
_3020
Psest_3021: Psest_3021 - NAD-dependent protein deacetylases, SIR2 family, at 3,209,451 to 3,210,215
_3021
Psest_3022: Psest_3022 - Predicted membrane protein, at 3,210,350 to 3,210,640
_3022
Group
Condition
Psest
_3018
Psest
_3019
Psest
_3020
Psest
_3021
Psest
_3022
stress
Benzalkonium Chloride 0.002 mg/ml
-0.1
-0.4
-0.8
-0.6
-1.2
stress
Def Benzethonium chloride 0.008 mM
-0.1
-1.1
-1.8
-0.0
-0.0
stress
nitrate 250 mM
+0.0
-1.2
-0.6
+0.2
-0.6
stress
Def Carbenicillin 0.008 mg/ml
+0.1
-0.9
-0.6
-0.1
-0.4
lb
LB
-0.2
-0.1
-0.5
-0.4
-0.6
stress
Def Benzalkonium Chloride 0.002 mg/ml
-0.1
-0.7
-0.3
-0.0
-0.5
stress
Benzethonium chloride 0.0125 mM
-0.6
-0.1
-0.1
-0.0
-0.9
carbon source
propionate (C)
+0.2
-0.1
-0.5
-0.9
-0.3
stress
Def Vancomycin 0.016 mg/ml
-0.0
-0.1
-1.6
+0.4
-0.3
stress
perchlorate 25 mM
-0.3
+0.1
-0.6
-0.4
-0.4
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.2
-0.7
+0.1
-0.2
-0.5
stress
Def Chlorate 40 mM
-0.3
-0.3
-0.1
+0.2
-0.9
stress
Carbenicillin 0.008 mg/ml
-0.3
-0.6
-1.0
+0.3
+0.4
stress
Benzethonium chloride 0.01 mM
-0.3
-0.2
-0.4
+0.4
-0.5
stress
Nalidixic 0.00390625 mg/ml
-0.1
+0.3
-0.7
+0.6
-1.0
stress
Nalidixic 0.00390625 mg/ml
+0.2
-0.5
-0.4
-0.4
+0.2
RCH2 grown on a colony of N2A2
+0.3
+0.3
-0.6
-0.7
-0.2
carbon source
L-tyrosine (C)
-0.5
-0.4
-0.3
-0.1
+0.6
stress
Bacitracin 0.25 mg/ml
-0.1
+0.2
+0.4
+0.1
-0.9
stress
Def Chloride 400 mM
+0.1
-0.2
+0.7
-0.1
-0.6
RCH2 grown on a colony of N2C3
-0.4
+0.5
+0.5
-0.2
-0.5
stress
Paraquat dichloride 0.015 mg/ml
+0.1
-0.4
+0.3
-0.2
+0.7
stress
Carbenicillin 0.0065 mg/ml
-0.1
+0.0
-0.5
+0.4
+0.8
stress
Thallium(I) acetate 0.1 mg/ml
-0.1
-0.2
-0.2
+0.2
+1.0
stress
Neomycin 0.004 mg/ml
-0.3
-0.3
+0.0
+0.3
+1.0
RCH2 grown on a colony of Serratia
+0.5
+0.1
-0.3
-0.2
+1.0
stress
Choline chloride 90 mM
-0.1
-0.1
+0.8
+0.3
+0.5
RCH2 grown on a colony of N2A2
+0.0
+0.2
-0.1
+1.3
-0.2
RCH2 grown on a colony of Serratia
+0.6
-0.0
+0.6
+0.6
-0.0
stress
Lactate-nitrate; anaerobic; cobalt stress sample2
+0.1
+0.0
+1.2
+0.4
+0.1
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