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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2996 and Psest_2997 are separated by 195 nucleotides
Psest_2997 and Psest_2998 are separated by 45 nucleotides
Psest_2998 and Psest_2999 are separated by 61 nucleotides
Psest_2999 and Psest_3000 are separated by 4 nucleotides
Psest_2996: Psest_2996 - Rhodanese-related sulfurtransferase, at 3,186,174 to 3,187,019
_2996
Psest_2997: Psest_2997 - Long-chain fatty acid transport protein, at 3,187,215 to 3,188,477
_2997
Psest_2998: Psest_2998 - Glutathione peroxidase, at 3,188,523 to 3,189,071
_2998
Psest_2999: Psest_2999 - molybdenum ABC transporter, periplasmic molybdate-binding protein, at 3,189,133 to 3,189,978
_2999
Psest_3000: Psest_3000 - molybdate ABC transporter, permease protein, at 3,189,983 to 3,190,663
_3000
Group
Condition
Psest
_2996
Psest
_2997
Psest
_2998
Psest
_2999
Psest
_3000
metal limitation
Anaerobic, 1 nM Mo, 500 nM W sample2
-0.1
-0.1
+0.1
-4.0
-4.3
stress
Lactate-nitrate; anaerobic; copper stress sample2
-0.2
+0.1
-0.0
-3.8
-4.2
stress
Lactate-nitrate; anaerobic; copper stress sample3
-0.3
+0.1
+0.2
-4.0
-4.1
metal limitation
Anaerobic, 1 nM Mo, 500 nM W sample1
-0.0
-0.2
-0.1
-4.0
-3.6
stress
Lactate-nitrate; anaerobic; copper stress sample1
+0.2
+0.0
-0.0
-3.9
-4.2
metal limitation
Anaerobic, 1 nM Mo, 500 nM W sample1
-0.0
+0.1
+0.1
-3.6
-3.1
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample2
-0.0
+0.1
+0.1
-2.9
-2.5
stress
Lactate-nitrate; anaerobic; dichromate stress sample2
-0.3
-0.1
+0.0
-2.5
-2.2
stress
Lactate-nitrate; anaerobic; cadmium stress sample2
+0.0
+0.1
+0.1
-2.4
-2.6
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample3
-0.1
+0.1
-0.0
-2.3
-2.3
stress
Anaerobic 500 uM Zinc chloride sample1
-0.0
-0.1
-0.0
-1.9
-2.5
carbon source
L-tyrosine (C)
-0.1
-4.1
-0.6
+0.2
+0.2
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample1
-0.1
+0.3
-0.0
-2.0
-2.4
stress
Lactate-nitrate; anaerobic; dichromate stress sample1
-0.2
-0.1
+0.2
-1.9
-2.2
stress
Lactate-nitrate; anaerobic; dichromate stress sample3
-0.2
+0.4
+0.1
-1.7
-2.6
stress
Lactate-nitrate; anaerobic; cadmium stress sample1
-0.0
+0.0
+0.2
-1.9
-2.1
stress
Lactate-nitrate; anaerobic; cobalt stress sample3
-0.0
+0.2
+0.1
-2.2
-1.7
anaerobic
Nitrate/ lactate media with Nitrate 250mM
+0.0
+0.1
-0.3
-1.6
-1.5
stress
Lactate-nitrate; anaerobic; cadmium stress sample3
+0.2
+0.2
+0.2
-2.1
-1.8
stress
Lactate-nitrate; anaerobic; nickel stress sample1
-0.1
-0.1
+0.2
-1.6
-1.6
stress
Lactate-nitrate; anaerobic; cobalt stress sample2
-0.1
+0.1
+0.3
-1.1
-2.1
metal limitation
Anaerobic, no iron sample2
-0.0
-0.1
+0.2
-1.8
-1.4
stress
Lactate-nitrate; anaerobic; nickel stress sample2
+0.1
+0.2
+0.3
-1.7
-1.6
carbon source
L-tyrosine (C)
-0.0
-3.0
+0.0
+0.5
-0.0
stress
perchlorate 25 mM
+0.1
+0.3
+0.1
+2.4
+2.1
stress
perchlorate 12.5 mM
+0.2
-0.1
-0.3
+2.6
+3.2
stress
perchlorate 12.5 mM
+0.1
+0.2
-0.0
+3.6
+3.0
stress
Chlorate 75 mM
-0.0
-0.8
+0.1
+4.6
+4.5
stress
Def Chlorate 40 mM
-0.0
+0.1
-0.3
+4.7
+4.8
stress
Def Chlorate 20 mM
+0.0
+0.1
-0.0
+4.7
+4.9
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