Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2988 and Psest_2989 are separated by 112 nucleotidesPsest_2989 and Psest_2990 are separated by 171 nucleotidesPsest_2990 and Psest_2991 are separated by 49 nucleotidesPsest_2991 and Psest_2992 are separated by 72 nucleotides Psest_2988: Psest_2988 - aspartate kinase, monofunctional class, at 3,177,046 to 3,178,284 _2988 Psest_2989: Psest_2989 - alanine--tRNA ligase, at 3,178,397 to 3,181,021 _2989 Psest_2990: Psest_2990 - Threonine aldolase, at 3,181,193 to 3,182,218 _2990 Psest_2991: Psest_2991 - hypothetical protein, at 3,182,268 to 3,183,488 _2991 Psest_2992: Psest_2992 - Uncharacterized conserved protein, at 3,183,561 to 3,184,010 _2992
Group Condition Psest_2988 Psest_2989 Psest_2990 Psest_2991 Psest_2992
carbon source Glycolic Acid (C) -5.7 N.D. -0.4 -0.0 +0.0
carbon source L-Leucine (C) -6.1 N.D. +0.1 -0.0 +0.2
stress Lactate-nitrate; anaerobic; cadmium stress sample2 -4.8 N.D. -0.3 -0.3 -0.4
metal limitation Lactate-nitrite; anaerobic; with copper; sample3 -5.2 N.D. -0.2 -0.4 +0.0
carbon source L-Leucine (C) -6.0 N.D. +0.0 +0.3 +0.1
nitrogen source L-Alanine (N) -5.3 N.D. -0.1 +0.1 -0.3
carbon source Anaerobic, Glucose Nitrate sample1 -5.0 N.D. -0.1 -0.2 -0.2
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample2 -4.3 N.D. -0.4 -0.4 -0.3
stress Lactate-nitrate; anaerobic; cobalt stress sample3 -4.7 N.D. -0.0 -0.4 -0.3
carbon source Anaerobic, Glucose Nitrate sample3 -5.0 N.D. -0.1 -0.1 -0.2
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample3 -4.2 N.D. -0.4 -0.3 -0.4
stress Def Dimethyl Sulfoxide 5 vol% -5.2 N.D. -0.0 +0.0 -0.0
metal limitation Lactate-nitrite with YE; anaerobic; sample3 -4.5 N.D. -0.0 -0.3 -0.3
nitrogen source L-Alanine (N) -5.3 N.D. +0.2 +0.0 -0.1
stress Lactate-nitrate; anaerobic; cadmium stress sample1 -4.7 N.D. -0.2 -0.1 -0.1
metal limitation Lactate-nitrite; anaerobic; sample2 -4.3 N.D. -0.3 -0.5 -0.1
nitrogen source L-Alanine (N) -5.1 N.D. +0.2 -0.1 -0.1
stress Lactate-nitrate; anaerobic sample1 -4.7 N.D. -0.3 -0.0 +0.1
carbon source Tween 20 (C) -5.2 N.D. -0.2 +0.0 +0.3
metal limitation Lactate-nitrite with YE; anaerobic; with copper; sample1 -4.1 N.D. -0.1 -0.3 -0.5
stress Lactate-nitrate; anaerobic; cobalt stress sample2 -4.6 N.D. -0.1 -0.0 -0.1
carbon source Tween 20 (C) -4.6 N.D. +0.0 -0.1 -0.3
nitrogen source Glycine (N) -4.9 N.D. +0.0 +0.1 +0.0
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample1 -4.4 N.D. +0.1 -0.3 -0.1
stress Lactate-nitrate; anaerobic; cadmium stress sample3 -4.6 N.D. +0.1 -0.4 +0.2
stress Lactate-nitrate; anaerobic; copper stress sample2 -4.3 N.D. -0.2 -0.4 +0.3
RCH2 grown on a colony of 8R2A -3.6 N.D. -0.2 +0.7 -1.4
nitrogen source Glycine (N) -5.0 N.D. -0.0 +0.2 +0.3
carbon source Glycolic Acid (C) -4.2 N.D. -0.1 -0.4 +0.4
stress Lactate-nitrate; anaerobic; nickel stress sample1 -3.9 N.D. -0.0 -0.2 +0.6
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