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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2987 and Psest_2988 are separated by 180 nucleotides
Psest_2988 and Psest_2989 are separated by 112 nucleotides
Psest_2989 and Psest_2990 are separated by 171 nucleotides
Psest_2990 and Psest_2991 are separated by 49 nucleotides
Psest_2987: Psest_2987 - carbon storage regulator (csrA), at 3,176,680 to 3,176,865
_2987
Psest_2988: Psest_2988 - aspartate kinase, monofunctional class, at 3,177,046 to 3,178,284
_2988
Psest_2989: Psest_2989 - alanine--tRNA ligase, at 3,178,397 to 3,181,021
_2989
Psest_2990: Psest_2990 - Threonine aldolase, at 3,181,193 to 3,182,218
_2990
Psest_2991: Psest_2991 - hypothetical protein, at 3,182,268 to 3,183,488
_2991
Group
Condition
Psest
_2987
Psest
_2988
Psest
_2989
Psest
_2990
Psest
_2991
carbon source
L-Leucine (C)
N.D.
-6.1
N.D.
+0.1
-0.0
carbon source
Glycolic Acid (C)
N.D.
-5.7
N.D.
-0.4
-0.0
metal limitation
Lactate-nitrite; anaerobic; with copper; sample3
N.D.
-5.2
N.D.
-0.2
-0.4
carbon source
L-Leucine (C)
N.D.
-6.0
N.D.
+0.0
+0.3
stress
Lactate-nitrate; anaerobic; cadmium stress sample2
N.D.
-4.8
N.D.
-0.3
-0.3
carbon source
Anaerobic, Glucose Nitrate sample1
N.D.
-5.0
N.D.
-0.1
-0.2
carbon source
Tween 20 (C)
N.D.
-5.2
N.D.
-0.2
+0.0
nitrogen source
L-Alanine (N)
N.D.
-5.3
N.D.
-0.1
+0.1
stress
Def Dimethyl Sulfoxide 5 vol%
N.D.
-5.2
N.D.
-0.0
+0.0
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample2
N.D.
-4.3
N.D.
-0.4
-0.4
carbon source
Anaerobic, Glucose Nitrate sample3
N.D.
-5.0
N.D.
-0.1
-0.1
metal limitation
Lactate-nitrite; anaerobic; sample2
N.D.
-4.3
N.D.
-0.3
-0.5
stress
Lactate-nitrate; anaerobic sample1
N.D.
-4.7
N.D.
-0.3
-0.0
nitrogen source
L-Alanine (N)
N.D.
-5.3
N.D.
+0.2
+0.0
stress
Lactate-nitrate; anaerobic; cobalt stress sample3
N.D.
-4.7
N.D.
-0.0
-0.4
stress
Lactate-nitrate; anaerobic; cadmium stress sample1
N.D.
-4.7
N.D.
-0.2
-0.1
nitrogen source
L-Alanine (N)
N.D.
-5.1
N.D.
+0.2
-0.1
stress
Lactate-nitrate; anaerobic; copper stress sample2
N.D.
-4.3
N.D.
-0.2
-0.4
stress
Lactate-nitrate; anaerobic; cadmium stress sample3
N.D.
-4.6
N.D.
+0.1
-0.4
metal limitation
Lactate-nitrite with YE; anaerobic; sample3
N.D.
-4.5
N.D.
-0.0
-0.3
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample3
N.D.
-4.2
N.D.
-0.4
-0.3
nitrogen source
Glycine (N)
N.D.
-5.0
N.D.
-0.0
+0.2
nitrogen source
Glycine (N)
N.D.
-4.9
N.D.
+0.0
+0.1
stress
Lactate-nitrate; anaerobic; cobalt stress sample2
N.D.
-4.6
N.D.
-0.1
-0.0
metal limitation
Lactate-nitrite with YE; anaerobic; sample2
N.D.
-4.1
N.D.
-0.2
-0.4
carbon source
Glycolic Acid (C)
N.D.
-4.2
N.D.
-0.1
-0.4
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample1
N.D.
-4.4
N.D.
+0.1
-0.3
carbon source
Tween 20 (C)
N.D.
-4.6
N.D.
+0.0
-0.1
carbon source
Anaerobic, Glucose Nitrate sample2
N.D.
-4.2
N.D.
-0.2
-0.1
metal limitation
Anaerobic, 100 nM, Mo 1 mM W sample1
N.D.
-4.3
N.D.
-0.1
+0.1
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