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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2985 and Psest_2986 are separated by 109 nucleotides
Psest_2986 and Psest_2987 are separated by 62 nucleotides
Psest_2987 and Psest_2988 are separated by 180 nucleotides
Psest_2988 and Psest_2989 are separated by 112 nucleotides
Psest_2985: Psest_2985 - tRNA_Arg_ACG, at 3,176,341 to 3,176,417
_2985
Psest_2986: Psest_2986 - tRNA_Ser_GCT, at 3,176,527 to 3,176,617
_2986
Psest_2987: Psest_2987 - carbon storage regulator (csrA), at 3,176,680 to 3,176,865
_2987
Psest_2988: Psest_2988 - aspartate kinase, monofunctional class, at 3,177,046 to 3,178,284
_2988
Psest_2989: Psest_2989 - alanine--tRNA ligase, at 3,178,397 to 3,181,021
_2989
Group
Condition
Psest
_2985
Psest
_2986
Psest
_2987
Psest
_2988
Psest
_2989
carbon source
L-Leucine (C)
N.D.
N.D.
N.D.
-6.1
N.D.
carbon source
L-Leucine (C)
N.D.
N.D.
N.D.
-6.0
N.D.
carbon source
Glycolic Acid (C)
N.D.
N.D.
N.D.
-5.7
N.D.
nitrogen source
L-Alanine (N)
N.D.
N.D.
N.D.
-5.3
N.D.
nitrogen source
L-Alanine (N)
N.D.
N.D.
N.D.
-5.3
N.D.
metal limitation
Lactate-nitrite; anaerobic; with copper; sample3
N.D.
N.D.
N.D.
-5.2
N.D.
stress
Def Dimethyl Sulfoxide 5 vol%
N.D.
N.D.
N.D.
-5.2
N.D.
carbon source
Tween 20 (C)
N.D.
N.D.
N.D.
-5.2
N.D.
nitrogen source
L-Alanine (N)
N.D.
N.D.
N.D.
-5.1
N.D.
carbon source
Anaerobic, Glucose Nitrate sample1
N.D.
N.D.
N.D.
-5.0
N.D.
carbon source
Anaerobic, Glucose Nitrate sample3
N.D.
N.D.
N.D.
-5.0
N.D.
nitrogen source
Glycine (N)
N.D.
N.D.
N.D.
-5.0
N.D.
nitrogen source
Glycine (N)
N.D.
N.D.
N.D.
-4.9
N.D.
stress
Lactate-nitrate; anaerobic; cadmium stress sample2
N.D.
N.D.
N.D.
-4.8
N.D.
stress
Lactate-nitrate; anaerobic sample1
N.D.
N.D.
N.D.
-4.7
N.D.
stress
Lactate-nitrate; anaerobic; cadmium stress sample1
N.D.
N.D.
N.D.
-4.7
N.D.
stress
Lactate-nitrate; anaerobic; cobalt stress sample3
N.D.
N.D.
N.D.
-4.7
N.D.
stress
Lactate-nitrate; anaerobic; cobalt stress sample2
N.D.
N.D.
N.D.
-4.6
N.D.
stress
Lactate-nitrate; anaerobic; cadmium stress sample3
N.D.
N.D.
N.D.
-4.6
N.D.
carbon source
Tween 20 (C)
N.D.
N.D.
N.D.
-4.6
N.D.
metal limitation
Lactate-nitrite with YE; anaerobic; sample3
N.D.
N.D.
N.D.
-4.5
N.D.
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample1
N.D.
N.D.
N.D.
-4.4
N.D.
metal limitation
Lactate-nitrite; anaerobic; with copper; sample1
N.D.
N.D.
N.D.
-4.4
N.D.
metal limitation
Anaerobic, 100 nM, Mo 1 mM W sample1
N.D.
N.D.
N.D.
-4.3
N.D.
stress
Lactate-nitrate; anaerobic; copper stress sample2
N.D.
N.D.
N.D.
-4.3
N.D.
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample2
N.D.
N.D.
N.D.
-4.3
N.D.
metal limitation
Lactate-nitrite; anaerobic; sample2
N.D.
N.D.
N.D.
-4.3
N.D.
metal limitation
Lactate-nitrite; anaerobic; with copper; sample2
N.D.
N.D.
N.D.
-4.2
N.D.
carbon source
Anaerobic, Glucose Nitrate sample2
N.D.
N.D.
N.D.
-4.2
N.D.
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample3
N.D.
N.D.
N.D.
-4.2
N.D.
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