Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2968 and Psest_2969 are separated by 195 nucleotidesPsest_2969 and Psest_2970 are separated by 34 nucleotidesPsest_2970 and Psest_2971 are separated by 79 nucleotidesPsest_2971 and Psest_2972 are separated by 113 nucleotides Psest_2968: Psest_2968 - flagellar basal-body rod protein FlgB, at 3,163,854 to 3,164,258 _2968 Psest_2969: Psest_2969 - Methylase of chemotaxis methyl-accepting proteins, at 3,164,454 to 3,165,278 _2969 Psest_2970: Psest_2970 - Chemotaxis signal transduction protein, at 3,165,313 to 3,166,245 _2970 Psest_2971: Psest_2971 - flagella basal body P-ring formation protein FlgA, at 3,166,325 to 3,167,077 _2971 Psest_2972: Psest_2972 - flagellar biosynthesis anti-sigma factor FlgM, at 3,167,191 to 3,167,520 _2972
Group Condition Psest_2968 Psest_2969 Psest_2970 Psest_2971 Psest_2972
carbon source L-Proline (C) -2.4 -0.6 -0.2 -1.7 N.D.
carbon source L-Proline (C) -3.0 -0.1 +0.2 -1.8 N.D.
carbon source L-Proline (C) -2.8 -0.2 +0.2 -1.7 N.D.
carbon source D-Alanine (C) -2.4 -0.4 -0.0 -1.3 N.D.
stress Anaerobic 500 uM Zinc chloride sample2 -2.7 -0.3 +0.0 -0.7 N.D.
stress Anaerobic 500 uM Zinc chloride sample3 -2.6 -0.3 +0.0 -0.8 N.D.
stress Anaerobic 500 uM Zinc chloride sample1 -2.8 -0.2 +0.1 -0.8 N.D.
carbon source D-Alanine (C) -2.0 -0.4 -0.0 -1.0 N.D.
stress Chlorite 0.06 mM -2.7 +0.4 -0.0 -1.0 N.D.
carbon source D-Maltose (C) -1.8 -0.0 -0.0 -0.6 N.D.
carbon source butyrate (C) -1.3 +0.2 -0.1 -1.2 N.D.
stress Bacitracin 0.25 mg/ml -1.9 +0.4 +0.1 -0.9 N.D.
carbon source butyrate (C) -1.2 +0.0 -0.0 -1.0 N.D.
stress Def Benzalkonium Chloride 0.002 mg/ml -1.6 +0.2 +0.3 -1.0 N.D.
carbon source D-Maltose (C) -1.8 +0.2 +0.1 -0.3 N.D.
stress Bacitracin 0.25 mg/ml -2.1 +0.5 +0.3 -0.2 N.D.
carbon source butyrate (C) -1.1 +0.4 +0.2 -0.9 N.D.
vitamin With vitamins t2 -4.0 +2.8 +0.7 +2.9 N.D.
carbon source RCH2 defined media +0.9 +1.0 +0.1 +1.1 N.D.
stress Vancomycin 0.016 mg/ml +1.2 +0.7 +0.2 +1.3 N.D.
stress Gentamicin 0.0016 mg/ml +1.4 +1.2 -0.2 +1.5 N.D.
nutrient Min media with glucose -2.0 +2.8 +0.6 +3.5 N.D.
vitamin With vitamins t1 -1.5 +2.8 +0.7 +3.3 N.D.
nutrient L-Histidine -1.4 +2.9 +0.6 +3.7 N.D.
nutrient Min media with glucose -1.6 +3.3 +0.6 +4.2 N.D.
nutrient L-Histidine -0.8 +2.7 +0.8 +4.0 N.D.
vitamin No vitamins t2 -1.5 +3.2 +0.9 +4.2 N.D.
vitamin No vitamins t1 +0.1 +3.2 +0.9 +4.0 N.D.
nutrient L-tyrosine -0.3 +3.3 +0.9 +5.1 N.D.
nutrient L-tyrosine +0.1 +3.8 +0.9 +4.3 N.D.
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