Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2966 and Psest_2967 are separated by 19 nucleotidesPsest_2967 and Psest_2968 are separated by 11 nucleotidesPsest_2968 and Psest_2969 are separated by 195 nucleotidesPsest_2969 and Psest_2970 are separated by 34 nucleotides Psest_2966: Psest_2966 - Flagellar hook capping protein, at 3,162,696 to 3,163,379 _2966 Psest_2967: Psest_2967 - flagellar basal-body rod protein FlgC, at 3,163,399 to 3,163,842 _2967 Psest_2968: Psest_2968 - flagellar basal-body rod protein FlgB, at 3,163,854 to 3,164,258 _2968 Psest_2969: Psest_2969 - Methylase of chemotaxis methyl-accepting proteins, at 3,164,454 to 3,165,278 _2969 Psest_2970: Psest_2970 - Chemotaxis signal transduction protein, at 3,165,313 to 3,166,245 _2970
Group Condition Psest_2966 Psest_2967 Psest_2968 Psest_2969 Psest_2970
stress Anaerobic 500 uM Zinc chloride sample1 +0.1 -4.5 -2.8 -0.2 +0.1
carbon source L-Proline (C) -1.3 -2.7 -2.4 -0.6 -0.2
carbon source L-Proline (C) -1.2 -2.9 -3.0 -0.1 +0.2
carbon source L-Proline (C) -1.3 -2.7 -2.8 -0.2 +0.2
stress Anaerobic 500 uM Zinc chloride sample3 -0.1 -3.0 -2.6 -0.3 +0.0
stress Anaerobic 500 uM Zinc chloride sample2 -0.0 -2.8 -2.7 -0.3 +0.0
carbon source D-Alanine (C) -0.1 -2.9 -2.0 -0.4 -0.0
carbon source D-Alanine (C) -0.0 -2.5 -2.4 -0.4 -0.0
carbon source D-Maltose (C) -0.4 -2.0 -1.8 -0.0 -0.0
stress Chlorite 0.06 mM +0.4 -2.4 -2.7 +0.4 -0.0
stress Lactate-nitrate; anaerobic; nickel stress sample1 +0.0 -2.3 -1.2 -0.2 -0.3
carbon source butyrate (C) -0.9 -2.3 -1.1 +0.4 +0.2
carbon source L-Leucine (C) -0.5 -1.8 -1.3 +0.2 -0.1
carbon source D-Maltose (C) -0.1 -1.8 -1.8 +0.2 +0.1
stress Def Benzalkonium Chloride 0.002 mg/ml -0.4 -1.8 -1.6 +0.2 +0.3
stress Bacitracin 0.25 mg/ml +2.0 -3.8 -2.1 +0.5 +0.3
temperature Glucose defined 30C timecourse1 timepoint 3 +0.5 -2.3 -1.2 +0.1 -0.1
vitamin With vitamins t2 +3.1 -5.3 -4.0 +2.8 +0.7
stress Bacitracin 0.25 mg/ml +2.1 -3.1 -1.9 +0.4 +0.1
nutrient Min media with glucose +3.1 -2.4 -2.0 +2.8 +0.6
vitamin With vitamins t1 +3.1 -2.3 -1.5 +2.8 +0.7
nutrient L-Histidine +3.6 -2.6 -0.8 +2.7 +0.8
nutrient L-Histidine +3.1 -1.3 -1.4 +2.9 +0.6
stress Vancomycin 0.016 mg/ml +1.4 +0.8 +1.2 +0.7 +0.2
nutrient Min media with glucose +3.7 -1.7 -1.6 +3.3 +0.6
stress Gentamicin 0.0016 mg/ml +1.3 +0.8 +1.4 +1.2 -0.2
vitamin No vitamins t2 +3.7 -1.6 -1.5 +3.2 +0.9
vitamin No vitamins t1 +3.5 -1.1 +0.1 +3.2 +0.9
nutrient L-tyrosine +4.2 -0.6 -0.3 +3.3 +0.9
nutrient L-tyrosine +4.2 -0.1 +0.1 +3.8 +0.9
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