Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_0290 and Psest_0291 overlap by 1 nucleotidesPsest_0291 and Psest_0292 are separated by 57 nucleotidesPsest_0292 and Psest_0293 are separated by 22 nucleotidesPsest_0293 and Psest_0294 overlap by 4 nucleotides Psest_0290: Psest_0290 - dihydroorotase, multifunctional complex type, at 305,220 to 306,494 _0290 Psest_0291: Psest_0291 - aspartate carbamoyltransferase, at 306,494 to 307,510 _0291 Psest_0292: Psest_0292 - Pyrimidine operon attenuation protein/uracil phosphoribosyltransferase, at 307,568 to 308,080 _0292 Psest_0293: Psest_0293 - RNAse H-fold protein YqgF, at 308,103 to 308,531 _0293 Psest_0294: Psest_0294 - Putative transcriptional regulator, at 308,528 to 309,097 _0294
Group Condition Psest_0290 Psest_0291 Psest_0292 Psest_0293 Psest_0294
stress Def Vancomycin 0.008 mg/ml N.D. N.D. -1.5 N.D. -1.0
nitrogen source L-Isoleucine (N) N.D. N.D. -1.8 N.D. -0.5
stress Carbenicillin 0.0065 mg/ml N.D. N.D. -1.4 N.D. -0.8
stress Def 2-Furfuraldehyde 0.032 vol% N.D. N.D. -0.8 N.D. -1.4
stress Def Polymyxin B sulfate 0.0001 mg/ml N.D. N.D. -1.4 N.D. -0.7
carbon source L-Proline (C) N.D. N.D. -1.6 N.D. -0.4
nitrogen source nitrite (N) N.D. N.D. -1.9 N.D. -0.1
nitrogen source L-Glutamic (N) N.D. N.D. -1.4 N.D. -0.6
nitrogen source L-Glutamic (N) N.D. N.D. -1.2 N.D. -0.7
vitamin With vitamins t2 N.D. N.D. -1.5 N.D. -0.4
stress Cobalt chloride 0.06 mM N.D. N.D. -1.1 N.D. -0.7
nitrogen source nitrite (N) N.D. N.D. -0.9 N.D. -0.9
nitrogen source L-Glutamine (N) N.D. N.D. -0.9 N.D. -0.9
stress Def Cephalothin 0.04 mg/ml N.D. N.D. -1.4 N.D. -0.4
stress Def sodium fluoride 25 mM N.D. N.D. -0.9 N.D. -0.8
temperature LB 30C timecourse2 timepoint 2 N.D. N.D. -0.6 N.D. -1.1
stress Def Chloride 400 mM N.D. N.D. -1.4 N.D. -0.4
carbon source L-Lactate (C) N.D. N.D. -1.1 N.D. -0.6
anaerobic Nitrate/ lactate media with Nitrate 250mM N.D. N.D. -1.1 N.D. -0.6
RCH2 grown on a colony of N2A2 N.D. N.D. -0.9 N.D. -0.7
carbon source L-Glutamine (C) N.D. N.D. -1.1 N.D. -0.6
carbon source butyrate (C) N.D. N.D. -0.8 N.D. -0.8
nitrogen source Parabanic Acid (N) N.D. N.D. -0.8 N.D. -0.8
nutrient Min media with glucose N.D. N.D. -1.6 N.D. +0.1
temperature Glucose defined 30C timecourse1 timepoint 2 N.D. N.D. -1.9 N.D. +0.5
nitrogen source nitrite (N) N.D. N.D. -1.3 N.D. +0.3
nitrogen source L-Citrulline (N) N.D. N.D. -1.2 N.D. +0.9
RCH2 grown on a colony of Serratia N.D. N.D. -0.9 N.D. +1.0
stress Lactate-nitrate; anaerobic; uranyl acetate stress sample3 N.D. N.D. +1.6 N.D. -0.9
stress Chlorate 75 mM N.D. N.D. +3.3 N.D. +0.2
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