Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2957 and Psest_2958 are separated by 120 nucleotidesPsest_2958 and Psest_2959 are separated by 12 nucleotidesPsest_2959 and Psest_2960 are separated by 3 nucleotidesPsest_2960 and Psest_2961 are separated by 10 nucleotides Psest_2957: Psest_2957 - competence protein ComEA helix-hairpin-helix repeat region, at 3,152,509 to 3,152,823 _2957 Psest_2958: Psest_2958 - flagellar hook-associated protein 3, at 3,152,944 to 3,154,212 _2958 Psest_2959: Psest_2959 - flagellar hook-associated protein FlgK, at 3,154,225 to 3,156,240 _2959 Psest_2960: Psest_2960 - flagellar rod assembly protein/muramidase FlgJ, at 3,156,244 to 3,157,416 _2960 Psest_2961: Psest_2961 - Flagellar basal-body P-ring protein, at 3,157,427 to 3,158,527 _2961
Group Condition Psest_2957 Psest_2958 Psest_2959 Psest_2960 Psest_2961
carbon source L-Proline (C) -0.2 -1.6 -1.8 -1.6 -1.7
carbon source L-Proline (C) -0.1 -1.5 -1.4 -1.5 -1.6
carbon source L-Proline (C) +0.2 -1.5 -1.6 -1.5 -1.6
stress Def Benzalkonium Chloride 0.002 mg/ml +0.5 -0.9 -0.6 -0.5 -1.8
carbon source butyrate (C) +0.1 +1.4 +1.8 +0.3 -1.2
carbon source D-Gluconic Acid (C) -1.0 +0.9 +0.8 +0.3 +1.6
carbon source D-Gluconic Acid (C) -0.8 +0.7 +0.7 +1.1 +1.0
carbon source L-Glutamine (C) -0.9 +1.5 +1.6 +0.5 +1.2
nitrogen source L-Isoleucine (N) +0.7 +0.9 +1.3 +0.8 +0.5
carbon source L-Glutamine (C) -0.1 +1.5 +1.6 +0.5 +0.8
carbon source RCH2 defined media +0.3 +0.9 +0.8 +1.0 +1.3
carbon source L-Glutamine (C) -0.2 +1.4 +1.5 +0.6 +1.3
carbon source Ethanol (C) -0.4 +1.4 +1.6 +1.2 +1.0
carbon source Ethanol (C) -0.1 +1.4 +1.4 +1.0 +1.3
stress Vancomycin 0.016 mg/ml -0.0 +1.6 +1.6 +0.9 +1.0
stress Cephalothin 0.04 mg/ml +0.2 +1.4 +1.6 +1.4 +0.9
stress Gentamicin 0.0016 mg/ml +0.1 +1.4 +1.6 +1.2 +1.4
stress Vancomycin 0.016 mg/ml -0.2 +1.9 +1.8 +1.5 +1.8
stress Bacitracin 0.25 mg/ml -0.3 +2.1 +2.0 +2.3 +1.6
stress Bacitracin 0.25 mg/ml +0.5 +2.1 +2.0 +2.2 +2.0
nutrient L-Histidine +0.1 +3.2 +3.0 +3.3 +3.4
vitamin With vitamins t2 -0.0 +2.8 +3.3 +3.1 +4.0
nutrient Min media with glucose +0.1 +3.3 +3.7 +3.3 +3.3
vitamin With vitamins t1 +0.1 +3.1 +3.6 +3.2 +4.0
vitamin No vitamins t1 +0.3 +3.2 +3.4 +3.6 +4.4
nutrient L-Histidine -0.3 +3.7 +3.7 +4.1 +3.8
vitamin No vitamins t2 +0.1 +3.2 +3.4 +3.7 +4.7
nutrient Min media with glucose -0.4 +3.8 +4.1 +4.2 +5.5
nutrient L-tyrosine +0.0 +4.2 +4.2 +4.9 +5.5
nutrient L-tyrosine +0.3 +4.4 +4.5 +4.9 +4.8
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