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Protein
Homologs
Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Number of genes on each side:
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5
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_0027 and Psest_0028 are separated by 152 nucleotides
Psest_0028 and Psest_0029 are separated by 43 nucleotides
Psest_0029 and Psest_0030 overlap by 4 nucleotides
Psest_0030 and Psest_0031 are separated by 12 nucleotides
Psest_0027: Psest_0027 - NADPH:quinone reductase and related Zn-dependent oxidoreductases, at 27,653 to 28,630
_0027
Psest_0028: Psest_0028 - Coproporphyrinogen III oxidase, at 28,783 to 29,700
_0028
Psest_0029: Psest_0029 - shikimate 5-dehydrogenase, at 29,744 to 30,556
_0029
Psest_0030: Psest_0030 - Putative NADH-flavin reductase, at 30,553 to 31,164
_0030
Psest_0031: Psest_0031 - Uncharacterized conserved protein, at 31,177 to 31,485
_0031
Group
Condition
Psest
_0027
Psest
_0028
Psest
_0029
Psest
_0030
Psest
_0031
stress
Thallium(I) acetate 0.09 mg/ml
+0.1
-3.2
N.D.
-1.0
-1.7
stress
syringaldehyde 3 mM
-0.0
-3.2
N.D.
-0.2
-2.0
stress
nitrite 2.5 mM
-0.0
-2.6
N.D.
-0.8
-1.4
stress
Cholin acetate 40 mM
+0.1
-2.9
N.D.
-0.1
-1.9
stress
D-Cycloserine 0.032 mg/ml
+0.2
-2.1
N.D.
-1.0
-1.6
RCH2 grown on a colony of 8R2A
-0.2
-0.8
N.D.
-0.5
-2.8
stress
Paraquat dichloride 0.015 mg/ml
-0.2
-2.6
N.D.
+0.0
-1.4
stress
Thallium(I) acetate 0.09 mg/ml
-0.2
-3.8
N.D.
+0.3
-0.4
stress
Thallium(I) acetate 0.08 mg/ml
+0.2
-2.0
N.D.
-0.1
-2.1
stress
Vanillin 2 mM
-0.2
-3.4
N.D.
+0.3
-0.7
stress
syringaldehyde 4 mM
-0.2
-2.5
N.D.
-0.1
-1.2
lb
LB
+0.1
-2.9
N.D.
-0.6
-0.3
stress
Aluminum chloride 0.3 mM
-0.5
-1.8
N.D.
-0.7
-0.8
stress
1-ethyl-3-methylimidazolium acetate 40 mM
+0.2
-2.7
N.D.
-0.3
-1.1
stress
5-Hydroxymethylfurfural 5 mM
-0.4
-3.1
N.D.
+0.3
-0.6
stress
Choline Lysine 20 mM
-0.3
-3.1
N.D.
+0.3
-0.6
stress
Cobalt chloride 0.06 mM
+0.1
-1.8
N.D.
-0.3
-1.6
stress
1-ethyl-3-methylimidazolium acetate 20 mM
+0.1
-3.2
N.D.
+0.1
-0.6
stress
Cisplatin 0.0016 mg/ml
+0.0
-1.0
N.D.
+0.4
-2.5
stress
Fusidic 0.016 mg/ml
+0.3
-1.8
N.D.
+0.1
-1.7
stress
syringaldehyde 4 mM
+0.3
-3.2
N.D.
+0.2
-0.3
lb
LB
+0.1
-1.6
N.D.
+0.6
-2.0
stress
Thallium(I) acetate 0.1 mg/ml
+0.5
-2.6
N.D.
-0.6
-0.1
stress
nitrite 2.5 mM
-0.1
-3.6
N.D.
+0.2
+0.8
stress
Thallium(I) acetate 0.08 mg/ml
+0.1
-3.3
N.D.
+0.1
+1.4
stress
Cobalt chloride 0.05 mM
-0.2
-2.9
N.D.
+0.8
+0.7
stress
Zinc 0.12 mM
+0.2
-2.2
N.D.
-0.2
+1.4
stress
Polymyxin B sulfate 0.0001 mg/ml
+0.0
-1.7
N.D.
+1.1
+1.8
stress
Chlorite 0.06 mM
+0.2
+3.7
N.D.
-0.3
-0.5
stress
A22 0.005 mg/ml
-0.4
+2.9
N.D.
+0.1
+0.7
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