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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2949 and Psest_2950 are separated by 69 nucleotides
Psest_2950 and Psest_2951 are separated by 173 nucleotides
Psest_2951 and Psest_2952 are separated by 186 nucleotides
Psest_2952 and Psest_2953 are separated by 235 nucleotides
Psest_2949: Psest_2949 - Aspartyl aminopeptidase, at 3,145,221 to 3,146,510
_2949
Psest_2950: Psest_2950 - putative NAD(P)H quinone oxidoreductase, PIG3 family, at 3,146,580 to 3,147,542
_2950
Psest_2951: Psest_2951 - C-terminal peptidase (prc), at 3,147,716 to 3,149,800
_2951
Psest_2952: Psest_2952 - hypothetical protein, at 3,149,987 to 3,150,148
_2952
Psest_2953: Psest_2953 - Histone acetyltransferase, at 3,150,384 to 3,150,851
_2953
Group
Condition
Psest
_2949
Psest
_2950
Psest
_2951
Psest
_2952
Psest
_2953
RCH2 grown on a colony of N2F3
-0.7
-0.1
N.D.
N.D.
-2.6
carbon source
propionate (C)
-1.0
-1.2
N.D.
N.D.
-0.8
nitrogen source
nitrite (N)
-1.4
-0.2
N.D.
N.D.
-0.9
nitrogen source
L-Alanine (N)
-0.6
+0.4
N.D.
N.D.
-1.5
nitrogen source
Parabanic Acid (N)
-0.4
+0.6
N.D.
N.D.
-1.8
stress
sodium fluoride 8.5 mM
+0.6
-0.1
N.D.
N.D.
-1.7
RCH2 grown on a colony of N2F3
-1.1
+1.2
N.D.
N.D.
-0.9
radiation
Ionizing radiation, 319.06 Gy,
-0.4
+0.8
N.D.
N.D.
-1.0
stress
Def Nalidixic 0.0005 mg/ml
+0.4
+0.7
N.D.
N.D.
-1.6
nitrogen source
Glycine (N)
-0.3
+1.1
N.D.
N.D.
-1.2
nitrogen source
L-Isoleucine (N)
-0.2
+1.0
N.D.
N.D.
-1.1
lb
LB
-0.5
-0.9
N.D.
N.D.
+1.0
stress
Def 2-Furfuraldehyde 0.032 vol%
+0.4
+1.1
N.D.
N.D.
-1.7
stress
Paraquat dichloride 0.015 mg/ml
+0.2
+1.2
N.D.
N.D.
-1.5
nitrogen source
nitrite (N)
-0.4
+1.1
N.D.
N.D.
-0.7
stress
Nalidixic 0.00390625 mg/ml
-0.3
+1.7
N.D.
N.D.
-1.3
stress
Def Neomycin 0.0008 mg/ml
-0.9
-0.4
N.D.
N.D.
+1.4
nitrogen source
nitrite (N)
-0.4
+1.7
N.D.
N.D.
-0.4
stress
Choline chloride 90 mM
+0.1
+1.6
N.D.
N.D.
-0.8
stress
Furfuryl Alcohol 0.05 vol%
+0.5
+1.4
N.D.
N.D.
-0.9
stress
Benzalkonium Chloride 0.002 mg/ml
+0.1
+1.9
N.D.
N.D.
-0.3
stress
Paraquat dichloride 0.015 mg/ml
-0.3
+1.6
N.D.
N.D.
+0.8
stress
Def Carbenicillin 0.008 mg/ml
+0.6
+1.9
N.D.
N.D.
-0.4
stress
Def Nalidixic 0.001 mg/ml
+0.8
+2.1
N.D.
N.D.
-0.7
stress
Lactate-nitrate; anaerobic; dichromate stress sample1
+0.8
+0.5
N.D.
N.D.
+1.1
stress
Cephalothin 0.04 mg/ml
+1.1
+0.9
N.D.
N.D.
+0.7
stress
L-Lysine 200 mM
+0.2
+2.4
N.D.
N.D.
+0.1
stress
Fusidic 0.016 mg/ml
+0.7
+2.3
N.D.
N.D.
-0.0
stress
Def Benzalkonium Chloride 0.002 mg/ml
+0.9
+3.0
N.D.
N.D.
+0.1
stress
A22 0.005 mg/ml
+0.6
+2.9
N.D.
N.D.
+0.5
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