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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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500 nt
Psest_2936 and Psest_2937 are separated by 101 nucleotides
Psest_2937 and Psest_2938 are separated by 241 nucleotides
Psest_2938 and Psest_2939 overlap by 1 nucleotides
Psest_2939 and Psest_2940 are separated by 278 nucleotides
Psest_2936: Psest_2936 - Cyanate permease, at 3,133,388 to 3,134,545
_2936
Psest_2937: Psest_2937 - Short-chain alcohol dehydrogenase of unknown specificity, at 3,134,647 to 3,135,456
_2937
Psest_2938: Psest_2938 - transporter, SSS family, at 3,135,698 to 3,137,353
_2938
Psest_2939: Psest_2939 - Predicted membrane protein, at 3,137,353 to 3,137,667
_2939
Psest_2940: Psest_2940 - Predicted membrane protein, at 3,137,946 to 3,138,170
_2940
Group
Condition
Psest
_2936
Psest
_2937
Psest
_2938
Psest
_2939
Psest
_2940
stress
nitrate 250 mM
-0.1
-0.9
-0.9
-1.6
-0.6
stress
Gentamicin 0.0016 mg/ml
-0.4
-0.6
-0.9
-1.1
-0.4
stress
Def 2-Furfuraldehyde 0.032 vol%
-0.5
+0.3
-1.3
-1.2
+0.1
stress
Def Chloride 400 mM
-0.2
-0.2
-0.9
-1.1
-0.2
RCH2 grown on a colony of Serratia
+0.0
-0.2
+0.0
+0.3
-2.7
stress
Choline Lysine 20 mM
-0.2
-0.6
-0.2
-0.1
-1.4
stress
Def Carbenicillin 0.008 mg/ml
-0.1
-0.4
+0.1
-0.5
-1.0
RCH2 grown on a colony of ecoli
-0.2
+0.5
-0.2
-0.1
-1.8
stress
Aluminum chloride 0.3 mM
-0.3
-0.4
-0.1
+0.4
-1.3
RCH2 grown on a colony of N2F3
+0.5
+0.2
-0.1
-1.3
-0.9
stress
Chloride 200 mM
-0.3
-0.7
-0.1
-0.3
+0.7
stress
Benzethonium chloride 0.0125 mM
+0.7
-0.2
+0.1
-0.0
-1.1
stress
L-Lysine 200 mM
-0.1
-0.5
-0.2
+1.0
-0.8
stress
Nalidixic 0.00390625 mg/ml
+0.1
-0.2
+0.0
+0.9
-1.5
RCH2 grown on a colony of Serratia
+0.2
+0.4
-0.1
+0.4
-1.5
stress
sodium fluoride 8.5 mM
+0.1
+0.3
+0.0
+0.5
-1.5
stress
Def Benzalkonium Chloride 0.002 mg/ml
+0.3
+0.6
-0.5
-1.1
+0.2
carbon source
propionate (C)
-0.5
+0.0
-0.1
+1.2
-1.0
stress
Chlorate 75 mM
+0.4
+0.0
-0.6
+0.4
-0.7
stress
Lactate-nitrate; anaerobic; cadmium stress sample1
-0.2
+0.4
-0.0
-0.8
+0.8
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
+0.4
+0.2
-0.4
-0.8
+0.8
stress
Benzethonium chloride 0.01 mM
+0.1
+0.8
-0.1
+0.8
-1.0
stress
Carbenicillin 0.008 mg/ml
+0.1
-0.7
+0.1
+1.0
+0.2
stress
Lactate-nitrate; anaerobic; uranyl acetate stress sample2
-0.1
+0.8
-0.1
-0.2
+0.9
stress
D-Cycloserine 0.032 mg/ml
-0.0
+0.3
-0.2
-0.3
+1.5
stress
nitrate 200 mM
-0.1
-0.4
-0.1
+0.6
+1.5
RCH2 grown on a colony of N2C3
-0.1
-0.1
+0.0
+0.9
+1.0
stress
Furfuryl Alcohol 0.05 vol%
+0.1
+0.5
+0.1
+1.4
-0.1
stress
Lactate-nitrate; anaerobic; cobalt stress sample3
-0.2
+1.2
-0.1
+0.4
+0.6
carbon source
L-tyrosine (C)
+0.4
+0.3
+0.5
+1.1
+0.5
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