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Protein
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Fitness for 5 genes in
Pseudomonas stutzeri RCH2
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Top 30 experiments (either direction), sorted by average fitness
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500 nt
Psest_2928 and Psest_2929 are separated by 6 nucleotides
Psest_2929 and Psest_2930 are separated by 64 nucleotides
Psest_2930 and Psest_2931 are separated by 136 nucleotides
Psest_2931 and Psest_2932 are separated by 119 nucleotides
Psest_2928: Psest_2928 - Subtilisin-like serine proteases, at 3,122,213 to 3,123,991
_2928
Psest_2929: Psest_2929 - Transcriptional regulators, at 3,123,998 to 3,124,471
_2929
Psest_2930: Psest_2930 - asparagine synthase (glutamine-hydrolyzing), at 3,124,536 to 3,126,419
_2930
Psest_2931: Psest_2931 - GNAT-family acetyltransferase TIGR03103, at 3,126,556 to 3,128,295
_2931
Psest_2932: Psest_2932 - hydrolase, peptidase M42 family, at 3,128,415 to 3,129,620
_2932
Group
Condition
Psest
_2928
Psest
_2929
Psest
_2930
Psest
_2931
Psest
_2932
stress
sodium fluoride 6.25 mM
-0.5
N.D.
-0.4
-0.3
-0.0
stress
5-Hydroxymethylfurfural 5 mM
-0.0
N.D.
-0.4
-0.2
-0.5
RCH2 grown on a colony of Serratia
-0.4
N.D.
-0.1
+0.1
-0.7
stress
nitrate 200 mM
-0.1
N.D.
-0.2
-0.4
-0.4
stress
Chlorate 75 mM
-0.1
N.D.
-0.6
-0.1
-0.2
RCH2 grown on a colony of N2F3
+0.1
N.D.
-0.3
-0.3
-0.6
RCH2 grown on a colony of Pseudomonas migulae strain N1B4
-0.6
N.D.
+0.2
-0.2
-0.5
stress
Paraquat dichloride 0.015 mg/ml
-0.5
N.D.
-0.2
-0.3
-0.0
stress
Chloride 200 mM
-0.2
N.D.
-0.4
-0.3
-0.0
stress
perchlorate 12.5 mM
-0.2
N.D.
-0.2
-0.0
-0.6
stress
Polymyxin B sulfate 0.0001 mg/ml
-0.5
N.D.
-0.4
+0.0
+0.0
stress
benzoic 0.4 mg/ml
-0.2
N.D.
-0.2
-0.3
-0.1
vitamin
No vitamins t2
-0.4
N.D.
-0.2
-0.2
+0.0
nutrient
Min media with glucose
-0.3
N.D.
+0.0
-0.2
-0.4
stress
nitrate 250 mM
+0.2
N.D.
-0.5
-0.2
+0.1
RCH2 grown on a colony of N2F3
-0.9
N.D.
+0.1
+0.1
+0.3
stress
Bacitracin 0.25 mg/ml
-0.3
N.D.
+0.1
-0.3
+0.2
temperature
LB 30C timecourse1 timepoint 3
+0.5
N.D.
-0.2
-0.2
-0.2
RCH2 grown on a colony of ecoli
-0.1
N.D.
-0.2
+0.4
-0.3
stress
acetate 80 mM
+0.2
N.D.
+0.1
+0.2
-0.5
temperature
LB 30C timecourse1 timepoint 1
+0.4
N.D.
+0.1
-0.2
-0.2
stress
Carbenicillin 0.0065 mg/ml
+0.6
N.D.
-0.1
-0.2
-0.2
stress
Def Carbenicillin 0.02 mg/ml
+0.5
N.D.
+0.1
+0.0
-0.3
stress
Benzethonium chloride 0.0125 mM
+0.5
N.D.
-0.1
+0.0
+0.3
stress
Thallium(I) acetate 0.08 mg/ml
+0.5
N.D.
+0.2
-0.1
+0.2
stress
Furfuryl Alcohol 0.05 vol%
+0.8
N.D.
+0.3
+0.1
-0.3
carbon source
Glucose defined media
+0.5
N.D.
+0.3
+0.2
-0.1
carbon source
RCH2 defined media
+0.6
N.D.
+0.1
-0.0
+0.3
stress
Def Carbenicillin 0.008 mg/ml
+0.8
N.D.
+0.1
-0.1
+0.1
stress
Cephalothin 0.04 mg/ml
+0.5
N.D.
-0.0
+0.2
+0.4
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