Fitness for 5 genes in Pseudomonas stutzeri RCH2

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500 ntPsest_2928 and Psest_2929 are separated by 6 nucleotidesPsest_2929 and Psest_2930 are separated by 64 nucleotidesPsest_2930 and Psest_2931 are separated by 136 nucleotidesPsest_2931 and Psest_2932 are separated by 119 nucleotides Psest_2928: Psest_2928 - Subtilisin-like serine proteases, at 3,122,213 to 3,123,991 _2928 Psest_2929: Psest_2929 - Transcriptional regulators, at 3,123,998 to 3,124,471 _2929 Psest_2930: Psest_2930 - asparagine synthase (glutamine-hydrolyzing), at 3,124,536 to 3,126,419 _2930 Psest_2931: Psest_2931 - GNAT-family acetyltransferase TIGR03103, at 3,126,556 to 3,128,295 _2931 Psest_2932: Psest_2932 - hydrolase, peptidase M42 family, at 3,128,415 to 3,129,620 _2932
Group Condition Psest_2928 Psest_2929 Psest_2930 Psest_2931 Psest_2932
stress sodium fluoride 6.25 mM -0.5 N.D. -0.4 -0.3 -0.0
stress 5-Hydroxymethylfurfural 5 mM -0.0 N.D. -0.4 -0.2 -0.5
RCH2 grown on a colony of Serratia -0.4 N.D. -0.1 +0.1 -0.7
stress nitrate 200 mM -0.1 N.D. -0.2 -0.4 -0.4
stress Chlorate 75 mM -0.1 N.D. -0.6 -0.1 -0.2
RCH2 grown on a colony of N2F3 +0.1 N.D. -0.3 -0.3 -0.6
RCH2 grown on a colony of Pseudomonas migulae strain N1B4 -0.6 N.D. +0.2 -0.2 -0.5
stress Paraquat dichloride 0.015 mg/ml -0.5 N.D. -0.2 -0.3 -0.0
stress Chloride 200 mM -0.2 N.D. -0.4 -0.3 -0.0
stress perchlorate 12.5 mM -0.2 N.D. -0.2 -0.0 -0.6
stress Polymyxin B sulfate 0.0001 mg/ml -0.5 N.D. -0.4 +0.0 +0.0
stress benzoic 0.4 mg/ml -0.2 N.D. -0.2 -0.3 -0.1
vitamin No vitamins t2 -0.4 N.D. -0.2 -0.2 +0.0
nutrient Min media with glucose -0.3 N.D. +0.0 -0.2 -0.4
stress nitrate 250 mM +0.2 N.D. -0.5 -0.2 +0.1
RCH2 grown on a colony of N2F3 -0.9 N.D. +0.1 +0.1 +0.3
stress Bacitracin 0.25 mg/ml -0.3 N.D. +0.1 -0.3 +0.2
temperature LB 30C timecourse1 timepoint 3 +0.5 N.D. -0.2 -0.2 -0.2
RCH2 grown on a colony of ecoli -0.1 N.D. -0.2 +0.4 -0.3
stress acetate 80 mM +0.2 N.D. +0.1 +0.2 -0.5
temperature LB 30C timecourse1 timepoint 1 +0.4 N.D. +0.1 -0.2 -0.2
stress Carbenicillin 0.0065 mg/ml +0.6 N.D. -0.1 -0.2 -0.2
stress Def Carbenicillin 0.02 mg/ml +0.5 N.D. +0.1 +0.0 -0.3
stress Benzethonium chloride 0.0125 mM +0.5 N.D. -0.1 +0.0 +0.3
stress Thallium(I) acetate 0.08 mg/ml +0.5 N.D. +0.2 -0.1 +0.2
stress Furfuryl Alcohol 0.05 vol% +0.8 N.D. +0.3 +0.1 -0.3
carbon source Glucose defined media +0.5 N.D. +0.3 +0.2 -0.1
carbon source RCH2 defined media +0.6 N.D. +0.1 -0.0 +0.3
stress Def Carbenicillin 0.008 mg/ml +0.8 N.D. +0.1 -0.1 +0.1
stress Cephalothin 0.04 mg/ml +0.5 N.D. -0.0 +0.2 +0.4
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